Parental gene:

NPC2, ENSCAFG00000016932

Aliases:NPC2, CE1
Description:Canis lupus familiaris Niemann-Pick disease, type C2 (NPC2), mRNA. [Source:RefSeq mRNA;Acc:NM_001003242]
Organism:Dog (Canis familiaris)
Coordinates:8:47641184..47650543(-)


>ENSCAFG00000016932
ACCTGTCTAGCCGCGATGCGTCTCTTGGTCGCCGCGTTCCTGCTCCTGGCGCTCGGCGCCTCGGCCCTGGCGGAGCCGGT
GCATTTCAAGGACTGTGGTTCTGCAGTTGGAGTTATAAAAGAACTGAATGTGAACCCATGCCCTGCCCAGCCTTGCAAAC
TGCACAAAGGCCAATCTTACAGTGTCAATGTCACCTTCACCAGTAATATTCCATCTCAAAGTAGCAAAGCCGTGGTGCAT
GGCATCGTGTTGGGCGTCGCAGTTCCCTTTCCCATTCCTGAGGCTGATGGTTGTAAGAGTGGAATCAACTGCCCCATCCA
GAAAGATAAGACCTACAGCTACCTGAACAAACTGCCAGTGAAGAACGAATACCCCTCTATAAAACTGGTGGTGCAGTGGA
TGCTTCTGGGCGACAACAATCAGCATCTCTTCTGCTGGGAAATCCCAGTTCAGATTGAAGGCTAG

Library Parental gene expression (RPM)
SRP017611_brain 18 .82 RPM
SRP017611_kidney 594 .33 RPM
SRP017611_liver 27 .34 RPM
SRP012049_cerebellum 54 .51 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000009488 ortholog_one2one 1 retrogene
retro_chof_2335,
Echinops telfairi ENSETEG00000003719 ortholog_one2one 2 retrogenes
retro_etel_1610, retro_etel_1866,
Loxodonta africana ENSLAFG00000002876 ortholog_one2one 1 retrogene
retro_lafr_289,
Tursiops truncatus ENSTTRG00000013025 ortholog_one2one 1 retrogene
retro_ttru_85,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_2050 98.70 100.00
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Download FASTA sequences of all ENSCAFG00000016932 retrocopies