Parental gene: | AAGAB, ENSCAFG00000017414 |
| Aliases: | None |
| Description: | alpha- and gamma-adaptin binding protein [Source:HGNC Symbol;Acc:25662] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 30:31370798..31423435(-) |
>ENSCAFG00000017414
ATGGCAACCCCACGCGCAGCGCGGCCCGTCCCACGCCGGCAGCGGAAGAGGGGGTGTGGGAGGAGTCAGGGCCGCCACCG
CCTCCCGCGCACGCGCCCCCCCCAGGCGCGTCTCCCCCGCGCGCCGGCCGCAGTGGTGCAGCCCGAGGCGGAAGCGGCTC
CGGGGCGGAAGCGGCTCGCGAGCGCAGCGATGGCTGCGGGCGTCCCCTGTGCGCTCGTCGCCAGCTGCTCCTCCAGCTTC
TCCGGAGACCGGCTGGTCCAGCATATCCTTGGAGCAGAGGATCTTATTGTGGAAGTGACTGCCGATGATGCCGTGAGGTT
TTATCCCTGGACCATTGATAATAAATACTATTCAGCAGATATCAATCTATGTGTGGTGCCAAACAAATATCTCGTCACTG
CAGAAATCGCGGAGTCTGTACAAGCATTTGTGATTTACTTTGACAGCACACAAAAATCTGGTCTTGATAGTGTTTCTTCA
TGGCTTCCGCTGGCAGAAGCATGGTTACCTGAAGTCATGATCTTGGTCTGTGACAGAGTGTGTGAAAATGGTGTAAACCG
GCAAAAAGCTCAAGAATGGTGTATCAAACATGGCTTTGAATTGGTAGAACTTAGCCCGGAAGAGTTGCCTGAGGAGGATG
ATGACTTCCCAGAATCTACAGGCGTAAAGCGAATCATTCAAGCCTTGAATGCAAACGTGTGGTCCAATGTAGTGATGAAG
AATGATAGGAACCAAGGCTTTAGCCTTCTTAGCTCATTGGCTGGAGCAAACCATAGCATTGGGTCAGCAGAGACGTGTCA
TTCAGAGCAGCCCCGTTTGCCAGCAGCAGCTAGGACTGAATCTCTCTTGGAGCATCGGGGTGGTGCATCTAACACAACAG
ACGCTCAGCCTGATAGCATCGTGGATCCCATGTTAGATCTGGATATTCAAGAATTAGCCAGCCTTACTACTGGTGGAGGA
GATTTGGAGAATTTTGAAAGACTCTTTTCAAAGTTAAAGGAAATGAAAGACAAGGCTGCGACGCTTCCTCACGAGCAAAG
AAAGTTGCATGCAGAAAAGGTGGCCAAAGCCTTCTGGATGGCAATTGGGGGAGACAGAGATGAAATTGAAGGCCTTTCAT
CTGATGAAGAACACTAA
ATGGCAACCCCACGCGCAGCGCGGCCCGTCCCACGCCGGCAGCGGAAGAGGGGGTGTGGGAGGAGTCAGGGCCGCCACCG
CCTCCCGCGCACGCGCCCCCCCCAGGCGCGTCTCCCCCGCGCGCCGGCCGCAGTGGTGCAGCCCGAGGCGGAAGCGGCTC
CGGGGCGGAAGCGGCTCGCGAGCGCAGCGATGGCTGCGGGCGTCCCCTGTGCGCTCGTCGCCAGCTGCTCCTCCAGCTTC
TCCGGAGACCGGCTGGTCCAGCATATCCTTGGAGCAGAGGATCTTATTGTGGAAGTGACTGCCGATGATGCCGTGAGGTT
TTATCCCTGGACCATTGATAATAAATACTATTCAGCAGATATCAATCTATGTGTGGTGCCAAACAAATATCTCGTCACTG
CAGAAATCGCGGAGTCTGTACAAGCATTTGTGATTTACTTTGACAGCACACAAAAATCTGGTCTTGATAGTGTTTCTTCA
TGGCTTCCGCTGGCAGAAGCATGGTTACCTGAAGTCATGATCTTGGTCTGTGACAGAGTGTGTGAAAATGGTGTAAACCG
GCAAAAAGCTCAAGAATGGTGTATCAAACATGGCTTTGAATTGGTAGAACTTAGCCCGGAAGAGTTGCCTGAGGAGGATG
ATGACTTCCCAGAATCTACAGGCGTAAAGCGAATCATTCAAGCCTTGAATGCAAACGTGTGGTCCAATGTAGTGATGAAG
AATGATAGGAACCAAGGCTTTAGCCTTCTTAGCTCATTGGCTGGAGCAAACCATAGCATTGGGTCAGCAGAGACGTGTCA
TTCAGAGCAGCCCCGTTTGCCAGCAGCAGCTAGGACTGAATCTCTCTTGGAGCATCGGGGTGGTGCATCTAACACAACAG
ACGCTCAGCCTGATAGCATCGTGGATCCCATGTTAGATCTGGATATTCAAGAATTAGCCAGCCTTACTACTGGTGGAGGA
GATTTGGAGAATTTTGAAAGACTCTTTTCAAAGTTAAAGGAAATGAAAGACAAGGCTGCGACGCTTCCTCACGAGCAAAG
AAAGTTGCATGCAGAAAAGGTGGCCAAAGCCTTCTGGATGGCAATTGGGGGAGACAGAGATGAAATTGAAGGCCTTTCAT
CTGATGAAGAACACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 65 .90 RPM |
| SRP017611_kidney | 44 .71 RPM |
| SRP017611_liver | 10 .08 RPM |
| SRP012049_cerebellum | 38 .39 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000040368 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009585 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000008424 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1891 | 88.26 | 60.85 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000017414 retrocopies