Parental gene: | EEF2, ENSCAFG00000019158 |
| Aliases: | None |
| Description: | eukaryotic translation elongation factor 2 [Source:HGNC Symbol;Acc:3214] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 20:55576876..55585906(+) |
>ENSCAFG00000019158
ATGGTGAACTTCACGGTAGACCAGATCCGGGCCATCATGGACAAGAAGGCCAACATCCGAAACATGTCCGTCATCGCCCA
CGTGGACCACGGCAAGTCCACGTTGACGGACTCGCTGGTGTGCAAGGCCGGTATCATTGCCTCCGCCCGCGCTGGGGAGA
CCCGCTTCACTGACACCCGGAAGGACGAGCAGGAGCGCTGCATCACCATCAAGTCCACGGCTATCTCACTCTTCTATGAG
CTCTCCGAAAACGACTTGAACTTTATCAAGCAGAGTAAGGATGGCTCTGGCTTTCTAATCAACCTCATCGACTCCCCGGG
GCACGTGGACTTCTCCTCAGAGGTGACTGCCGCCCTCCGTGTCACCGACGGTGCCTTGGTGGTAGTGGACTGTGTGTCTG
GTGTGTGCGTGCAGACAGAGACGGTGCTGCGGCAGGCCATTGCAGAGCGCATCAAGCCAGTGCTGATGATGAACAAGATG
GACCGGGCTCTTCTGGAGCTGCAGCTGGAGCCTGAGGAGCTCTACCAGACCTTCCAGCGCATTGTGGAGAACGTCAACGT
CATCATTTCTACGTATGGGGAGGGCGAGAGCGGTCCCATGGGCAACATCATGATCGACCCTGTACTTGGGACCGTTGGCT
TTGGGTCTGGACTCCACGGTTGGGCCTTTACCTTGAAGCAGTTTGCAGAGATGTATGTGGCCAAATTTGCTGCCAAGGGC
GAGGGCCAGCTGGGGCCTGCTGAGCGGGCCAAGAAAGTGGAGGACATGATGAAGAAGCTGTGGGGTGACCGGTATTTTGA
TCCAGCCAACGGCAAATTCAGCAAGTCAGCCACCAGCCCTGACGGCAAGAAGCTACCGCGGACGTTTTGCCAGCTCATCT
TGGACCCTATTTTCAAGGTGTTTGATGCGATCATGAATTTCAAGAAAGAGGAGACCGCAAAGCTGATTGAAAAGCTGGAC
ATCAAGCTGGACAGTGAAGACAAAGATAAGGAAGGCAAACCACTTCTGAAGGCTGTGATGCGCCGCTGGCTACCTGCCGG
GGATGCTTTGCTGCAGATGATCACCATCCATCTGCCTTCCCCTGTGACAGCCCAGAAATACCGCTGTGAGCTCTTGTATG
AGGGCCCCCCAGACGACGAGGCAGCCATGGGCATTAAAAGCTGTGACCCCAAAGGCCCTCTCATGATGTACATTTCTAAA
ATGGTGCCAACCTCCGACAAAGGTCGGTTCTACGCCTTTGGTCGTGTATTCTCGGGGCTGGTGTCCACTGGCCTGAAAGT
CAGGATCATGGGGCCCAACTACACCCCTGGGAAGAAGGAGGACCTGTACCTGAAGCCCATCCAGAGAACAATCCTGATGA
TGGGCCGTTATGTTGAGCCTATTGAAGATGTGCCTTGTGGGAACATTGTGGGTCTAGTGGGAGTGGACCAGTTCCTGGTG
AAGACTGGCACCATCACCACCTTTGAGCATGCCCACAACATGAGGGTGATGAAGTTCAGCGTGAGCCCCGTTGTCCGGGT
TGCTGTGGAGGCAAAGAATCCAGCTGACCTTCCCAAGCTAGTGGAGGGTCTGAAACGGCTGGCCAAGTCGGACCCCATGG
TGCAGTGCATCATTGAGGAGTCCGGGGAGCACATCATCGCGGGGGCTGGGGAGCTGCACCTGGAGATCTGTCTGAAGGAC
CTGGAGGAGGACCATGCGTGCATTCCCATCAAGAAATCTGACCCTGTTGTCTCCTATCGTGAGACCGTCAGTGAGGAGTC
GAATGTGCTCTGCTTGTCCAAGTCCCCCAACAAGCACAACCGGCTGTACATGAAGGCACGGCCTTTCCCTGACGGCCTGG
CTGAGGACATTGACAAGGGTGAGGTGTCTGCCCGCCAGGAGCTCAAGCAGCGGGCCCGCTATCTGGCAGAAAAGTATGAG
TGGGATGTGGCTGAGGCCCGCAAGATCTGGTGCTTCGGGCCTGACGGCACTGGCCCCAACGTCCTCACTGATATCACTAA
GGGTGTGCAGTACCTCAACGAGATCAAGGATAGCGTGGTAGCTGGCTTCCAGTGGGCCACCAAAGAGGGTGCTCTGTGTG
AGGAAAACATGCGTGGTGTTCGCTTCGATGTCCACGATGTGACCCTGCACGCAGACGCTATCCACCGCGGGGGTGGCCAG
ATTATCCCCACTGCCCGGCGCTGCCTCTACGCCAGTGTGCTGACTGCCCAGCCCCGGCTTATGGAGCCTATCTACCTTGT
GGAGATTCAGTGTCCAGAACAAGTGGTTGGTGGCATCTATGGTGTCCTGAATAGGAAGCGAGGTCACGTCTTTGAGGAGT
CCCAGGTGGCCGGCACTCCCATGTTTGTTGTGAAGGCCTACCTGCCTGTGAATGAGTCCTTTGGCTTCACTGCTGACCTG
AGGTCCAACACCGGTGGCCAGGCCTTCCCCCAGTGCGTATTTGACCACTGGCAGATCCTGCCCGGGGATCCCTTCGACAA
CACCAGCCGCCCCAGCCAGGTGGTGGCTGAAACACGCAAGCGTAAAGGCTTGAAGGAAGGCATCCCTGCCCTGGACAACT
TCCTGGACAAATTGTAG
ATGGTGAACTTCACGGTAGACCAGATCCGGGCCATCATGGACAAGAAGGCCAACATCCGAAACATGTCCGTCATCGCCCA
CGTGGACCACGGCAAGTCCACGTTGACGGACTCGCTGGTGTGCAAGGCCGGTATCATTGCCTCCGCCCGCGCTGGGGAGA
CCCGCTTCACTGACACCCGGAAGGACGAGCAGGAGCGCTGCATCACCATCAAGTCCACGGCTATCTCACTCTTCTATGAG
CTCTCCGAAAACGACTTGAACTTTATCAAGCAGAGTAAGGATGGCTCTGGCTTTCTAATCAACCTCATCGACTCCCCGGG
GCACGTGGACTTCTCCTCAGAGGTGACTGCCGCCCTCCGTGTCACCGACGGTGCCTTGGTGGTAGTGGACTGTGTGTCTG
GTGTGTGCGTGCAGACAGAGACGGTGCTGCGGCAGGCCATTGCAGAGCGCATCAAGCCAGTGCTGATGATGAACAAGATG
GACCGGGCTCTTCTGGAGCTGCAGCTGGAGCCTGAGGAGCTCTACCAGACCTTCCAGCGCATTGTGGAGAACGTCAACGT
CATCATTTCTACGTATGGGGAGGGCGAGAGCGGTCCCATGGGCAACATCATGATCGACCCTGTACTTGGGACCGTTGGCT
TTGGGTCTGGACTCCACGGTTGGGCCTTTACCTTGAAGCAGTTTGCAGAGATGTATGTGGCCAAATTTGCTGCCAAGGGC
GAGGGCCAGCTGGGGCCTGCTGAGCGGGCCAAGAAAGTGGAGGACATGATGAAGAAGCTGTGGGGTGACCGGTATTTTGA
TCCAGCCAACGGCAAATTCAGCAAGTCAGCCACCAGCCCTGACGGCAAGAAGCTACCGCGGACGTTTTGCCAGCTCATCT
TGGACCCTATTTTCAAGGTGTTTGATGCGATCATGAATTTCAAGAAAGAGGAGACCGCAAAGCTGATTGAAAAGCTGGAC
ATCAAGCTGGACAGTGAAGACAAAGATAAGGAAGGCAAACCACTTCTGAAGGCTGTGATGCGCCGCTGGCTACCTGCCGG
GGATGCTTTGCTGCAGATGATCACCATCCATCTGCCTTCCCCTGTGACAGCCCAGAAATACCGCTGTGAGCTCTTGTATG
AGGGCCCCCCAGACGACGAGGCAGCCATGGGCATTAAAAGCTGTGACCCCAAAGGCCCTCTCATGATGTACATTTCTAAA
ATGGTGCCAACCTCCGACAAAGGTCGGTTCTACGCCTTTGGTCGTGTATTCTCGGGGCTGGTGTCCACTGGCCTGAAAGT
CAGGATCATGGGGCCCAACTACACCCCTGGGAAGAAGGAGGACCTGTACCTGAAGCCCATCCAGAGAACAATCCTGATGA
TGGGCCGTTATGTTGAGCCTATTGAAGATGTGCCTTGTGGGAACATTGTGGGTCTAGTGGGAGTGGACCAGTTCCTGGTG
AAGACTGGCACCATCACCACCTTTGAGCATGCCCACAACATGAGGGTGATGAAGTTCAGCGTGAGCCCCGTTGTCCGGGT
TGCTGTGGAGGCAAAGAATCCAGCTGACCTTCCCAAGCTAGTGGAGGGTCTGAAACGGCTGGCCAAGTCGGACCCCATGG
TGCAGTGCATCATTGAGGAGTCCGGGGAGCACATCATCGCGGGGGCTGGGGAGCTGCACCTGGAGATCTGTCTGAAGGAC
CTGGAGGAGGACCATGCGTGCATTCCCATCAAGAAATCTGACCCTGTTGTCTCCTATCGTGAGACCGTCAGTGAGGAGTC
GAATGTGCTCTGCTTGTCCAAGTCCCCCAACAAGCACAACCGGCTGTACATGAAGGCACGGCCTTTCCCTGACGGCCTGG
CTGAGGACATTGACAAGGGTGAGGTGTCTGCCCGCCAGGAGCTCAAGCAGCGGGCCCGCTATCTGGCAGAAAAGTATGAG
TGGGATGTGGCTGAGGCCCGCAAGATCTGGTGCTTCGGGCCTGACGGCACTGGCCCCAACGTCCTCACTGATATCACTAA
GGGTGTGCAGTACCTCAACGAGATCAAGGATAGCGTGGTAGCTGGCTTCCAGTGGGCCACCAAAGAGGGTGCTCTGTGTG
AGGAAAACATGCGTGGTGTTCGCTTCGATGTCCACGATGTGACCCTGCACGCAGACGCTATCCACCGCGGGGGTGGCCAG
ATTATCCCCACTGCCCGGCGCTGCCTCTACGCCAGTGTGCTGACTGCCCAGCCCCGGCTTATGGAGCCTATCTACCTTGT
GGAGATTCAGTGTCCAGAACAAGTGGTTGGTGGCATCTATGGTGTCCTGAATAGGAAGCGAGGTCACGTCTTTGAGGAGT
CCCAGGTGGCCGGCACTCCCATGTTTGTTGTGAAGGCCTACCTGCCTGTGAATGAGTCCTTTGGCTTCACTGCTGACCTG
AGGTCCAACACCGGTGGCCAGGCCTTCCCCCAGTGCGTATTTGACCACTGGCAGATCCTGCCCGGGGATCCCTTCGACAA
CACCAGCCGCCCCAGCCAGGTGGTGGCTGAAACACGCAAGCGTAAAGGCTTGAAGGAAGGCATCCCTGCCCTGGACAACT
TCCTGGACAAATTGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 779 .79 RPM |
| SRP017611_kidney | 1623 .85 RPM |
| SRP017611_liver | 1151 .95 RPM |
| SRP012049_cerebellum | 1534 .85 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000004258 | ortholog_one2one | 2 retrogenes | |
| Latimeria chalumnae | ENSLACG00000011124 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022767 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000000750 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000034994 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1503 | 89.39 | 83.10 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000019158 retrocopies