Parental gene: | C1orf194, ENSCAFG00000019853 |
| Aliases: | None |
| Description: | chromosome 1 open reading frame 194 [Source:HGNC Symbol;Acc:32331] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 6:42682109..42692027(+) |
>ENSCAFG00000019853
ATGCCTTTCCCCCGAGACCCTCTCCAGCGCCCTACGTTGGAAAACGATGACTCCTACCTGGGGAAACTCCGGGCTTCCAA
GAAACTGCCATATAAGAACCCAACTCACCTTGCTCAGCAACAGGAACCCTGGAGTCGGCTCAGCTCAACTCCCACAATCA
CCTCCACGAGGCGGGATATTTATTTTCTTGATCCTGAGATACCAAAGGATGACCTGGATTTCCGCTTAGCAGCCTTGTAC
AACCACCACACAGGGACATTCAAGAACAAAAGTGAGATACTTTTACACCAGGAGACCACCCAGGATATCCATGGAATCAT
CAAGACCCAATTCCCTGGAGAACTTTTACCCCCTCCTCCGCCACCTTCCGTCACTTCCCGAGCTAACATCAGACACTGGA
TCAACCCTAAGAAGGAGTCTATCCACAGCATCCAGGGATCCATAGTGTCCCCTCACACTGCTGCCACCAATGGAGGCTAC
TCCCGAAAGAATGATGGTGGCTTCTTCTCTACTTAG
ATGCCTTTCCCCCGAGACCCTCTCCAGCGCCCTACGTTGGAAAACGATGACTCCTACCTGGGGAAACTCCGGGCTTCCAA
GAAACTGCCATATAAGAACCCAACTCACCTTGCTCAGCAACAGGAACCCTGGAGTCGGCTCAGCTCAACTCCCACAATCA
CCTCCACGAGGCGGGATATTTATTTTCTTGATCCTGAGATACCAAAGGATGACCTGGATTTCCGCTTAGCAGCCTTGTAC
AACCACCACACAGGGACATTCAAGAACAAAAGTGAGATACTTTTACACCAGGAGACCACCCAGGATATCCATGGAATCAT
CAAGACCCAATTCCCTGGAGAACTTTTACCCCCTCCTCCGCCACCTTCCGTCACTTCCCGAGCTAACATCAGACACTGGA
TCAACCCTAAGAAGGAGTCTATCCACAGCATCCAGGGATCCATAGTGTCCCCTCACACTGCTGCCACCAATGGAGGCTAC
TCCCGAAAGAATGATGGTGGCTTCTTCTCTACTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 14 .53 RPM |
| SRP017611_kidney | 1 .12 RPM |
| SRP017611_liver | 0 .00 RPM |
| SRP012049_cerebellum | 4 .41 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000002197 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000002787 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_1217 | 85.71 | 81.87 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_1651 | 91.28 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cfam_1827 | 75.68 | 64.33 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000019853 retrocopies