Parental gene: | KRT5, ENSCHOG00000011913 |
| Aliases: | None |
| Description: | keratin 5 [Source:HGNC Symbol;Acc:6442] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_7174:600..9618(-) |
>ENSCHOG00000011913
ATGTCTCGCCAATCGAGCGTGTCTTTCCGGAGCGGGGGCAGCCGGAGCTTCAGCGCTGCCTCAGCCATCACCCCGGGCAT
CTCCCGCACCAGTTTCAGCTCTGTGTCCCGGTCTGGGGGTGGCGGTGGTGGCTTTGGCAGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCGCTT
CCTGGAGCAGCAGAACAAAGTTCTGGACACCAAGTGGACCCTGCTCCAGGAGCAGGGCACCAAGACCATAAGGCAGAACC
TGGATCCTCTGTTTGAGCAGTACATCAATAACCTCAGGAGGCAGCTGGACTCCATCCTCGGGGAGAGAGGCCGCCTGGAC
GCGGAGCTGAGGAACATGCAGGACTTGGTGGAGGACTTCAAGAACAAGTACGAAGATGAAATCAACAAGCGAACCACCGC
TGAGAATGAGTTTGTGATGCTGAAGAAGGACGTGGACGCTGCCTACATGAACAAGGTAGAGTTGGAGGCCAAGGCTGATG
CGCTGATGGATGAGATCAACTTCCTGAAGATATTCTTTGAGGCGGAGCTGTCTCAGATGCAGACCCACATCTCGGACACA
TCCGTGGTCCTCTCCATGGACAACAACCGCTCCCTGGACCTGGACAGCATCATCGCCGAGGTCAAGGCCCAGTACGAGGA
CATTGCCAACCGCAGCCGGACAGAAGCCGAGAGCTGGTACCAGACCAAGTATGAGGAGCTGCAGCAGACAGCTGGGCGGC
ATGGCGATGACCTCCGCAACACCAAGCACGAGATTTCTGAGATGAACCGCATGATCCAGAGGCTGAGAGCCGAGATTGAC
AATGTCAAGAAGCAGTGCGCCAACCTGCAGTCAGCCATCGCTGAGGCTGAACAGCGAGGGGAGCTGGCCCTCAAAGATGC
CAGGAACAAGCTGGCAGAGCTGGAGGATGCCCTGCAGAAGGCCAAGCAGGACATGGCCCGACTGCTGAAAGAGTACCAGG
AGCTGATGAACACCAAGCTGGCCCTGGACGTGGAGATCGCCACCTACCGCAAGCTGCTGGAGGGCGAGGAGTGCAGACTG
ACTGGAGAAGGAGTTGGACCAGTCAACATCTCTGTCGTCACAAACAGCATCTCCTCTGCCTATGGTGGAGGCGGTGGCCT
TGGCGGTGGCTTTGGCGGTAGCGTTGGCGGTCCTTTTGGCGGTGCTCTTAGCGGAGGTCTCACCAGTGGTCTTGGAGCCA
GCAGCGGGGGTTACTACTCCAGCAGCAGTGGGGGCATTGGCCTAAGTGGTGGGCTCGGCACTGGGGGCTCTGGCTTCAGT
GCGGGCAGTGGCCGAGGCACAGGAGTGGGCTTTGGCACTGGTGGAGGCAGCAGCTCCAGCGTCAAATTTGTCTCCACCAC
CTCCTCCACCCGGAAGAGCTTCAAGAGCTAA
ATGTCTCGCCAATCGAGCGTGTCTTTCCGGAGCGGGGGCAGCCGGAGCTTCAGCGCTGCCTCAGCCATCACCCCGGGCAT
CTCCCGCACCAGTTTCAGCTCTGTGTCCCGGTCTGGGGGTGGCGGTGGTGGCTTTGGCAGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCGCTT
CCTGGAGCAGCAGAACAAAGTTCTGGACACCAAGTGGACCCTGCTCCAGGAGCAGGGCACCAAGACCATAAGGCAGAACC
TGGATCCTCTGTTTGAGCAGTACATCAATAACCTCAGGAGGCAGCTGGACTCCATCCTCGGGGAGAGAGGCCGCCTGGAC
GCGGAGCTGAGGAACATGCAGGACTTGGTGGAGGACTTCAAGAACAAGTACGAAGATGAAATCAACAAGCGAACCACCGC
TGAGAATGAGTTTGTGATGCTGAAGAAGGACGTGGACGCTGCCTACATGAACAAGGTAGAGTTGGAGGCCAAGGCTGATG
CGCTGATGGATGAGATCAACTTCCTGAAGATATTCTTTGAGGCGGAGCTGTCTCAGATGCAGACCCACATCTCGGACACA
TCCGTGGTCCTCTCCATGGACAACAACCGCTCCCTGGACCTGGACAGCATCATCGCCGAGGTCAAGGCCCAGTACGAGGA
CATTGCCAACCGCAGCCGGACAGAAGCCGAGAGCTGGTACCAGACCAAGTATGAGGAGCTGCAGCAGACAGCTGGGCGGC
ATGGCGATGACCTCCGCAACACCAAGCACGAGATTTCTGAGATGAACCGCATGATCCAGAGGCTGAGAGCCGAGATTGAC
AATGTCAAGAAGCAGTGCGCCAACCTGCAGTCAGCCATCGCTGAGGCTGAACAGCGAGGGGAGCTGGCCCTCAAAGATGC
CAGGAACAAGCTGGCAGAGCTGGAGGATGCCCTGCAGAAGGCCAAGCAGGACATGGCCCGACTGCTGAAAGAGTACCAGG
AGCTGATGAACACCAAGCTGGCCCTGGACGTGGAGATCGCCACCTACCGCAAGCTGCTGGAGGGCGAGGAGTGCAGACTG
ACTGGAGAAGGAGTTGGACCAGTCAACATCTCTGTCGTCACAAACAGCATCTCCTCTGCCTATGGTGGAGGCGGTGGCCT
TGGCGGTGGCTTTGGCGGTAGCGTTGGCGGTCCTTTTGGCGGTGCTCTTAGCGGAGGTCTCACCAGTGGTCTTGGAGCCA
GCAGCGGGGGTTACTACTCCAGCAGCAGTGGGGGCATTGGCCTAAGTGGTGGGCTCGGCACTGGGGGCTCTGGCTTCAGT
GCGGGCAGTGGCCGAGGCACAGGAGTGGGCTTTGGCACTGGTGGAGGCAGCAGCTCCAGCGTCAAATTTGTCTCCACCAC
CTCCTCCACCCGGAAGAGCTTCAAGAGCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000003743 | within_species_paralog | 10 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000009412 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000007907 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017746 | ortholog_one2one | 5 retrogenes | |
| Pongo abelii | ENSPPYG00000004548 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000011707 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_778 | 60.50 | 53.52 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_1848 | 63.24 | 53.52 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_2381 | 64.83 | 57.38 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_2385 | 59.81 | 53.52 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000011913 retrocopies