Parental gene: | SPDL1, ENSCHOG00000013141 |
| Aliases: | None |
| Description: | spindle apparatus coiled-coil protein 1 [Source:HGNC Symbol;Acc:26010] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_319:29545..47336(+) |
>ENSCHOG00000013141
ATGGAGGCAGATATAATCGCAGATCTTCGATGCAAGCTCAAAGAGGTTGAAGAAGAACGACTAAAAGCTGCACAGTATGG
TTTACAACTAGTGGAAAGCCAAAGTGAATTGCAGAATCAACTGGACAAATGTCGTAATGAAATTATGACCATGACTGAGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTTAGAAAAACTGAAAGCTGAATTAGATGAAGCTAGGCTTAGTGAAAAGCAGCTGAAGCACAAAG
TAGAGCATCAGAAGGAACTCCTGTCTTGTAAATCAGAGGAAATGCGGATAATGTCTGAACGTGTACATGAAACCATGTCT
TCAGAAATGCTGGCTCTTCAAATCGAGCTGACTGAAATGGAAAGTATGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTAAAGAAGAAAAGGAGG
AACGAGAGAGGGAAGCAGTTTACTATAATGCGTTAGAGAAAGCTCGTGTAGCAAATCAGGATCTTCAAGTGCAATTGGAC
CAAGCTCTTCAGCAAGCCTTGGACCCCAATAGTAAAGGCAACTCTTTGTTTGCAGAGGTGGAAGACCGAAGGGCAGCAAT
GGAACGTCAGCTTATCAGTATGAAAGTCAAGTATCAGTCACTAAAGAAGCAAAATGCATTTAATAGAGAACAGATGCAAA
GAATGAAGTTGCAAATTGCCACATTGCTACAGATGAAAGGGTCTCAGTCTGAATTTGAACAGCAGGAACGGTTGCTTGCC
ATGTTGGAGCAGAAAAATGGTGAAATAAAACATCTTTTAGGTGAAATAAGAAGTCTGGAGAAATTTAAGAGTTTATATGA
AAGTATGGAATCTAAATCTTCATCCAACTCGGGCATTCTGGAAGATAACACCTATTATACAGATTTACTTCAGATAAAAC
TTGATAACTTAAACAAAGAAAATGAAAGCACTAAAGGCGAACTCTCTATACAGCGAATGAAAGCATTATTTGAGAGCCAG
CGGGCTCTGGATATTGAGCGAAAGCTTTTTGCAAATGAAAGATGCCTCCAGCTCTCCCAAAGTGAAAATATGAAACTGAG
AGCTAAACTAGATGAATTAAAGCTGAAGTATGAACCTGAAGAGAAAATTGAAGTGCCTGTACTCAAAAAGAGGCGTGAGG
TACTGCCTGTGGATATAACCACTTCTAAAGATGTATGTGACAACTGTGCTGTCAGGGAAGAAGTGTATAGATGGCCGACT
CTGAAAGAGGAGGCACAAACGTGTTCTAACAATTTAGAAGATAACAACCTGCAGTTAGAAAAGACAGTTTCTATAAACAC
ACCAGTAGTCAGTCTCTCGCCTAACAAAAATCTATCAACGAATATGCAACCAACGAAGGAAAAGAAATGTGTGAAACTCA
CAGGAGTTCCAGCTGACTCTGAAGTCTTAAGTGAAAGAAGTGGAAACACCCCTAACTCTTCCAGGTTAGCTGCTGAATCA
AGGCTTCAAACAGAAGTTCAAGAAGGGAAGGAAACTGCAAGCAAATTGGAAAAGGAAACTTGTAAGAAATCACACCCTAT
TCTATACGTATCCTCCAAATCGACTCCAGAGACACAGTGCCCTCAGCAGTAA
ATGGAGGCAGATATAATCGCAGATCTTCGATGCAAGCTCAAAGAGGTTGAAGAAGAACGACTAAAAGCTGCACAGTATGG
TTTACAACTAGTGGAAAGCCAAAGTGAATTGCAGAATCAACTGGACAAATGTCGTAATGAAATTATGACCATGACTGAGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTTAGAAAAACTGAAAGCTGAATTAGATGAAGCTAGGCTTAGTGAAAAGCAGCTGAAGCACAAAG
TAGAGCATCAGAAGGAACTCCTGTCTTGTAAATCAGAGGAAATGCGGATAATGTCTGAACGTGTACATGAAACCATGTCT
TCAGAAATGCTGGCTCTTCAAATCGAGCTGACTGAAATGGAAAGTATGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTAAAGAAGAAAAGGAGG
AACGAGAGAGGGAAGCAGTTTACTATAATGCGTTAGAGAAAGCTCGTGTAGCAAATCAGGATCTTCAAGTGCAATTGGAC
CAAGCTCTTCAGCAAGCCTTGGACCCCAATAGTAAAGGCAACTCTTTGTTTGCAGAGGTGGAAGACCGAAGGGCAGCAAT
GGAACGTCAGCTTATCAGTATGAAAGTCAAGTATCAGTCACTAAAGAAGCAAAATGCATTTAATAGAGAACAGATGCAAA
GAATGAAGTTGCAAATTGCCACATTGCTACAGATGAAAGGGTCTCAGTCTGAATTTGAACAGCAGGAACGGTTGCTTGCC
ATGTTGGAGCAGAAAAATGGTGAAATAAAACATCTTTTAGGTGAAATAAGAAGTCTGGAGAAATTTAAGAGTTTATATGA
AAGTATGGAATCTAAATCTTCATCCAACTCGGGCATTCTGGAAGATAACACCTATTATACAGATTTACTTCAGATAAAAC
TTGATAACTTAAACAAAGAAAATGAAAGCACTAAAGGCGAACTCTCTATACAGCGAATGAAAGCATTATTTGAGAGCCAG
CGGGCTCTGGATATTGAGCGAAAGCTTTTTGCAAATGAAAGATGCCTCCAGCTCTCCCAAAGTGAAAATATGAAACTGAG
AGCTAAACTAGATGAATTAAAGCTGAAGTATGAACCTGAAGAGAAAATTGAAGTGCCTGTACTCAAAAAGAGGCGTGAGG
TACTGCCTGTGGATATAACCACTTCTAAAGATGTATGTGACAACTGTGCTGTCAGGGAAGAAGTGTATAGATGGCCGACT
CTGAAAGAGGAGGCACAAACGTGTTCTAACAATTTAGAAGATAACAACCTGCAGTTAGAAAAGACAGTTTCTATAAACAC
ACCAGTAGTCAGTCTCTCGCCTAACAAAAATCTATCAACGAATATGCAACCAACGAAGGAAAAGAAATGTGTGAAACTCA
CAGGAGTTCCAGCTGACTCTGAAGTCTTAAGTGAAAGAAGTGGAAACACCCCTAACTCTTCCAGGTTAGCTGCTGAATCA
AGGCTTCAAACAGAAGTTCAAGAAGGGAAGGAAACTGCAAGCAAATTGGAAAAGGAAACTTGTAAGAAATCACACCCTAT
TCTATACGTATCCTCCAAATCGACTCCAGAGACACAGTGCCCTCAGCAGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000004745 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_198 | 96.73 | 65.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_1356 | 96.73 | 65.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_1565 | 96.48 | 65.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_1882 | 95.41 | 50.08 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_chof_2505 | 96.73 | 65.67 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000013141 retrocopies