Parental gene:

CCNC, ENSCJAG00000001388

Aliases:None
Description:cyclin C [Source:HGNC Symbol;Acc:1581]
Organism:Marmoset (Callithrix jacchus)
Coordinates:4:98726072..98755932(-)


>ENSCJAG00000001388
ATGGCAGGGAACTTTTGGCAGAGCTCCCACTATTTGCAATGGATTTTGGATAAACAAGATCTGTTGAAGGAGCGCCAAAA
GGATTTAAAGTTTCTCTCGGAAGAAGAATATTGGAAGTTACAAATATTTTTTACAAATGTTATCCAGGCATTAGGTGAAC
ATCTTAAATTAAGACAACAAGTTATTGCCACTGCTACAGTATATTTCAAGAGATTCTATGCCAGGTATTCTCTGAAAAGT
ATAGATCCTGTATTAATGGCTCCTACATGTGTGTTTTTGGCATCCAAAGTAGAGGAATTTGGAGTAGTTTCAAATACAAG
ATTGACTGCTGCTGCTACTTCTGTATTAAAAACTAGATTTTCATATGCCTTTCCAAAGGAATTTCCTTATAGGATGAATC
ATATATTAGAATGTGAATTCTATCTGTTAGAACTAATGGATTGTTGCTTGATAGTGTATCATCCTTATAGACCTTTGCTC
CAGTATGTGCAGGACATGGGCCAAGAAGACATGTTGCTTCCCCTTGCATGGAGGATAGTGAATGATACCTACAGAACGGA
TCTTTGCCTACTGTATCCTCCTTTCATGATAGCTTTAGCTTGCCTACATGTAGCCTGTGTTGTACAGCAGAAAGATGCCA
GGCAATGGTTTGCTGAGCTTTCTGTGGATATGGAGAAGATTTTGGAAATAATCAGGGTTATTTTAAAACTATATGAGCAG
TGGAAGAATTTCGATGAAAGAAAAGAGATGGCAACTATACTTAGTAAGATGCCAAAACCAAAACCACCTCCAAACAGTGA
AGGAGAGCAGGGTCCAAATGGAAGTCAGAACTCTAGCTACAGCCAATCTTAA

Library Parental gene expression (RPM)
SRP051959_colon 18 .55 RPM
SRP051959_heart 16 .10 RPM
SRP051959_kidney 23 .83 RPM
SRP051959_liver 24 .61 RPM
SRP051959_lung 19 .29 RPM
SRP051959_lymph_node 21 .39 RPM
SRP051959_skeletal_muscle 10 .70 RPM
SRP051959_spleen 22 .63 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000015744 ortholog_one2one 3 retrogenes
retro_btau_1206, retro_btau_1536, retro_btau_1836,
Callithrix jacchus ENSCJAG00000006738 other_paralog 1 retrogene
retro_cjac_1273,
Callithrix jacchus ENSCJAG00000011407 within_species_paralog 1 retrogene
retro_cjac_1814,
Dasypus novemcinctus ENSDNOG00000011999 possible_ortholog 3 retrogenes
retro_dnov_1153, retro_dnov_216, retro_dnov_2243,
Echinops telfairi ENSETEG00000002643 ortholog_one2one 1 retrogene
retro_etel_1441,
Otolemur garnettii ENSOGAG00000001116 ortholog_one2one 1 retrogene
retro_ogar_2123,
Sorex araneus ENSSARG00000004726 ortholog_one2one 2 retrogenes
retro_sara_141, retro_sara_583,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_780 85.26 87.99
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Download FASTA sequences of all ENSCJAG00000001388 retrocopies