Parental gene: | CTDSPL2, ENSCJAG00000002423 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 10:21587388..21696613(+) |
>ENSCJAG00000002423
ATGAGGCTGAGAACACGGAAAGCTTCTCAGCAGTCAAATCAAATCCAAACACAACGCACTGCCAGAGCAAAGAGGAAATA
TTCAGAGGTTGATGATAGCCTGCCTTCAGGAGGAGAAAAACCACGGAAGAATGAAACCGGCTTGTTGTCTTCAATTAAAA
AATTTATTAAAGGAAGCACACCTAAGGAAGAGAGAGAAAATCCTTCAAAACGGAGTAGAATTGAACGTGATATAGATAAC
AATTTGATCACGTCAACACCAAGAGCAGGAGAAAAACCTAACAAACAGATATCTCGAGTAAGACGGAAAAGTCAAGTAAA
TGGAGAGGCTGGTAGTTATGAAATGACAAATCAACATGTAAAACAAAATGGAAAATTAGAAGATAATCCTTCCGCTGGCA
GTCCTCCAAGGACTACTTTGTTGGGGACCATATTTTCACCTGTCTTCAACTTTTTTTCACCAGCAAATAAAAATGGAACA
TCAGGATCAGATTCTCCAGGACAGGCTGTGGAAGCTGAAGAAATAGTAAAACAGCTTGATATGGAACAGGTGGATGAGAT
CACTACGAGTACTACTACATCAACTAATGGAGCAGCTTACTCAAATCAAGCAGTTCAAGTGAGAGCATCGATAAACAATG
GTTTAGAAGAAGCAGAAGAAACAGTTAATCGTGATATCCCACCCCTTACAGCGCCAGTAACTCCAGATAGTGGTTATTCA
TCAGCCCATGCAGAGGCCACCTATGAAGAAGACTGGGAAGTATTTGACCCCTATTATTTCATCAAACATGTCCCACCACT
GACAGAAGAACAACTAAATAGGAAACCTGCTCTTCCGTTGAAAACAAGAAGCACACCGGAATTCTCCCTAGTTTTAGACT
TGGATGAAACACTAGTGCACTGTAGTCTAAATGAGCTAGAAGATGCAGCACTTACTTTTCCAGTCCTTTTCCAAGATGTC
ATTTATCAGGTTTATGTGAGATTAAGACCATTTTTCAGGGAATTCCTGGAACGAATGTCTCAGATGTATGAGATCATTCT
TTTTACTGCTTCTAAGAAGGTGTATGCAGACAAGTTACTGAACATACTAGACCCTAAAAAGCAACTGGTCAGGCACCGGC
TTTTCCGTGAACATTGTGTTTGTGTACAAGGAAACTATATAAAGGACTTAAATATTCTTGGAAGAGATCTTTCAAAAACT
ATAATAATTGACAACTCACCACAAGCCTTTGCATATCAGCTTTCTAATGGAATCCCTATAGAAAGTTGGTTTATGGATAA
AAATGACAATGAACTCCTAAAATTGATTCCATTCCTGGAGAAGCTTGTAGAACTGAATGAAGATGTTCGACCACACATCA
GAGACAGATTTCGCTTGCATGATTTGCTGCCCCCAGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_colon | 26 .40 RPM |
| SRP051959_heart | 23 .66 RPM |
| SRP051959_kidney | 28 .84 RPM |
| SRP051959_liver | 17 .35 RPM |
| SRP051959_lung | 37 .77 RPM |
| SRP051959_lymph_node | 41 .30 RPM |
| SRP051959_skeletal_muscle | 14 .19 RPM |
| SRP051959_spleen | 38 .07 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000006503 | within_species_paralog | 2 retrogenes | |
| Homo sapiens | ENSG00000137770 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000016742 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_4201 | 75.00 | 99.79 | Please wait, loading  |
Please wait, loading |
Please wait, loading |
Download FASTA sequences of all ENSCJAG00000002423 retrocopies