Parental gene:

BTG3, ENSCJAG00000003406

Aliases:None
Description:BTG family, member 3 [Source:HGNC Symbol;Acc:1132]
Organism:Marmoset (Callithrix jacchus)
Coordinates:21:22234917..22256318(-)


>ENSCJAG00000003406
ATGAAGAACGAAATTGCTGCTGTTGTCTTCTTTTTCACAAGGCTAGTTCGAAAACACGATAAGTTGAAAAAAGAGGCAGT
TGAGAGGTTTGCTGAGAAATTGACTCTAATACTTCAAGAAAAATATAAAAATCACTGGTATCCAGAAAAACCATCAAAAG
GACAGGCCTACAGATGTATTCGTGTCAATAAATTTCAGAGAGTTGATCCCGATGTCCTAAAAGCCTGTGAAAACAGCTGC
ATCTTGTATAGTGACCTGGGCTTGCCAAAGGAGCTCACTCTCTGGGTGGACCCATGTGAGGTGTGCTGTCGTAGAGATGG
GGTTTCACCATTTTGGCCAGGCTGGTCTCAAAATCCTGACCTCTTGACCCACCCTCCTCAACCTCCCAAAGTGCTAGATT
ACAGACGTGAGCCACTGTGCCTGGCCTCCTCCTTTTTGATTATGTACGGAGAGAAAAACAATGCATTCATTGTTGCCAGC
TTTGAAAATGAAGATGAGAACAAAGATGAGATCTCCAGGAAAGTTACCAGGGCCTTTGATAAGGTTACCTCTGATTATCA
TTCAGGATCCTCCTCTTCAGATGAAGAAACAAGTAAGGAAATGGAAGTGAAGACCAATTTGGTGACTGCAGCTGCAAGCC
CTGTGTACCAGATTTCAGAACTTATATTTCCACCTCTTCCAATGTGGCACCCTTTGCCCAGAAAAAAACCAGGAATGTAT
CGAGGGAATGGCCATCAGAATCACTACCCTCCTCCTGTTCCATTTGGTTATCCAAATCAGGGAAGGAAAAATAAACCATA
TCGCCCAATTCCAGTGACATGGGGGGTACCTCCCCCTGGAATGCATTGTGACCGGAACCACTGGATTAATCCTCACATGT
TAGCACCTCACTAG

Library Parental gene expression (RPM)
SRP051959_colon 5 .39 RPM
SRP051959_heart 9 .75 RPM
SRP051959_kidney 8 .45 RPM
SRP051959_liver 3 .90 RPM
SRP051959_lung 8 .30 RPM
SRP051959_lymph_node 3 .61 RPM
SRP051959_skeletal_muscle 2 .64 RPM
SRP051959_spleen 7 .33 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000012987 ortholog_one2one 2 retrogenes
retro_dnov_1703, retro_dnov_2682,
Macaca mulatta ENSMMUG00000002116 ortholog_one2one 1 retrogene
retro_mmul_2534,
Mustela putorius furo ENSMPUG00000010746 ortholog_one2many 1 retrogene
retro_mputfur_849,
Mus musculus ENSMUSG00000022863 ortholog_one2many 1 retrogene
retro_mmus_225,
Otolemur garnettii ENSOGAG00000013303 ortholog_one2many 8 retrogenes
retro_ogar_1693, retro_ogar_1755, retro_ogar_2575, retro_ogar_2769, retro_ogar_2795, retro_ogar_3346, retro_ogar_524, retro_ogar_551,
Ochotona princeps ENSOPRG00000012837 ortholog_one2one 1 retrogene
retro_opri_381,
Ictidomys tridecemlineatus ENSSTOG00000010285 ortholog_one2many 1 retrogene
retro_itri_617,
Tarsius syrichta ENSTSYG00000006151 ortholog_one2one 5 retrogenes
retro_tsyr_1172, retro_tsyr_1406, retro_tsyr_1753, retro_tsyr_231, retro_tsyr_495,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_4118 59.70 51.38
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Download FASTA sequences of all ENSCJAG00000003406 retrocopies