Parental gene: | PDSS1, ENSCJAG00000004695 |
| Aliases: | None |
| Description: | prenyl (decaprenyl) diphosphate synthase, subunit 1 [Source:HGNC Symbol;Acc:17759] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 7:24185927..24245614(+) |
>ENSCJAG00000004695
ATGGCCTCGCGCTGGTGGCGCTGGCGGCGGGGCTGCTCCTGGAGGCCTGCGGCTCGGAGTCCAGAGCCCGGCTCCCCCGG
CCTTGCGGGGCAGCCGGGGCCGCGCGCCGCTGCAGACGCTTGCTCGCAGGTGAGGTCCCGAGAGAATATGCGTCTGTCTC
AAATACCCTATTTTAATCTTGTGAAGCATCTGACATCTGCCTGTCCAAATATATACAGTATATCACGGTTTCATCATACA
ACCCCAGACAGTAAAACACACAGTGGTGAGAAATACACCGATCCTTTCAAACTCGGTTGGAGAGACTTGAAAGGTCTGTA
TGAGGACATTAGAAAGGAACTGCTCATATCAACATCAGAACTTAAGGAAATGTCTGAGTACTACTTTGATGGAAAAGAGA
AAGCCTTTCGACCAATTATTGTGGCACTAATGGCCCGAGCATGCAATATTCATCATAACAACTCCCAACATGTGCAAGCC
AGCCAGCGCACCATAGCCTTAATTGCAGAAATGATCCACACTGCTAGTCTTGTTCATGATGACGTTATTGACGATGCAAG
TTCTCGAAGAGGAAAACACACAGTTGATAAGATCTGGGGTGAAAAGAAGGCTGTTCTTGCTGGAGATTTAATTCTTTCTG
CAGCATCTATAGCTCTGGCACGAATTGGAAATACAACCGTTATATCTATTTTAACCCAAGTTATTGAAGATTCGGTGCGT
AGTGAATTTCTTCAGCTTGGGTCAAAAGAAAATGAGAATGAAAGATTTGCACACTACCTTGAAAAGCCCTTTAAGAAGAC
CGCCAGCCTGATAGCCAACAGTTATAAAGCAGTCTCTGTTCTAGGATGCCCTGACCCAGTGGTGCATGAGATCGCCTATC
AGTACGGGAAGAATATAGGAATAGCTTTTCAGCTAATAGATGATGTACTGGACTTCACCTCATGTTCTGACCAGATGGGC
AAACCAACGTCAGCTGATCTGAAGCTTGGGTTAGCCACTGGTCCTGTCCTGTTCGCCTGTCAGCAGTTCCCAGAAATGAA
TGCTATGATCATGAGACGGTTCAGTTTGCCGGGAGACGTGGACAGAGCGAGACAGTATGTATTACAGAGTGATGGTGTGC
AACAAACAACCTACCTCGCCCAGCAGTACTGCCATGAAGCAGTAAGAGAGATCAGTAAACTTCGACCATCCCCAGAAAGA
GATGCTCTCATTCAACTTTCAGAAATTGTACTCACAAGAGATAAATGA
ATGGCCTCGCGCTGGTGGCGCTGGCGGCGGGGCTGCTCCTGGAGGCCTGCGGCTCGGAGTCCAGAGCCCGGCTCCCCCGG
CCTTGCGGGGCAGCCGGGGCCGCGCGCCGCTGCAGACGCTTGCTCGCAGGTGAGGTCCCGAGAGAATATGCGTCTGTCTC
AAATACCCTATTTTAATCTTGTGAAGCATCTGACATCTGCCTGTCCAAATATATACAGTATATCACGGTTTCATCATACA
ACCCCAGACAGTAAAACACACAGTGGTGAGAAATACACCGATCCTTTCAAACTCGGTTGGAGAGACTTGAAAGGTCTGTA
TGAGGACATTAGAAAGGAACTGCTCATATCAACATCAGAACTTAAGGAAATGTCTGAGTACTACTTTGATGGAAAAGAGA
AAGCCTTTCGACCAATTATTGTGGCACTAATGGCCCGAGCATGCAATATTCATCATAACAACTCCCAACATGTGCAAGCC
AGCCAGCGCACCATAGCCTTAATTGCAGAAATGATCCACACTGCTAGTCTTGTTCATGATGACGTTATTGACGATGCAAG
TTCTCGAAGAGGAAAACACACAGTTGATAAGATCTGGGGTGAAAAGAAGGCTGTTCTTGCTGGAGATTTAATTCTTTCTG
CAGCATCTATAGCTCTGGCACGAATTGGAAATACAACCGTTATATCTATTTTAACCCAAGTTATTGAAGATTCGGTGCGT
AGTGAATTTCTTCAGCTTGGGTCAAAAGAAAATGAGAATGAAAGATTTGCACACTACCTTGAAAAGCCCTTTAAGAAGAC
CGCCAGCCTGATAGCCAACAGTTATAAAGCAGTCTCTGTTCTAGGATGCCCTGACCCAGTGGTGCATGAGATCGCCTATC
AGTACGGGAAGAATATAGGAATAGCTTTTCAGCTAATAGATGATGTACTGGACTTCACCTCATGTTCTGACCAGATGGGC
AAACCAACGTCAGCTGATCTGAAGCTTGGGTTAGCCACTGGTCCTGTCCTGTTCGCCTGTCAGCAGTTCCCAGAAATGAA
TGCTATGATCATGAGACGGTTCAGTTTGCCGGGAGACGTGGACAGAGCGAGACAGTATGTATTACAGAGTGATGGTGTGC
AACAAACAACCTACCTCGCCCAGCAGTACTGCCATGAAGCAGTAAGAGAGATCAGTAAACTTCGACCATCCCCAGAAAGA
GATGCTCTCATTCAACTTTCAGAAATTGTACTCACAAGAGATAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 5 .02 RPM |
| SRP051959_skeletal_muscle | 2 .31 RPM |
| SRP051959_lymph_node | 5 .16 RPM |
| SRP051959_lung | 4 .16 RPM |
| SRP051959_liver | 1 .69 RPM |
| SRP051959_kidney | 2 .93 RPM |
| SRP051959_heart | 2 .82 RPM |
| SRP051959_colon | 6 .66 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macaca mulatta | ENSMMUG00000005076 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000016836 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000002374 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_831 | 83.94 | 85.30 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000004695 retrocopies