Parental gene:

ENSCJAG00000013012

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:6:18901627..18910485(-)


>ENSCJAG00000013012
ATGCAGGCTGTAAGAAACGCGGGGTCGTGGCTCCTGCGGAGTTGGCCCCCGACGTCTGGCAGGGTTGTGGCCAGGACGGC
GGCCCGGACCATCCACACAGGCGCCCGGCAGCTGCAAGACGCTGCAGCCAAGCAGGAAGTTGAAGAGAAGTCGGCAGCTC
CCAGACACACCAGCTTCAGCATTTACCCTCCTATTCCAGGAGAGGAGAGCTCTCTGAGGTGGGCAGGAAAGAAGTTTGAG
GAGATCCCAATTGCACACATTAAAGCATCCTACAACAACACACAGATCCAGGTACTCTCTGCCAGTAACCAGCCCCTTGC
CCATGCTTCCTGTGGCACAGAGGGATTTCGGAATGCCAGGAAGGGCACAGGCATCGCAGCACAGACAGCAGGCATAGCCG
CAGCGGCGAAAGCTATACAAAAGGGTGTGACCCACATCCGAGTTGTGGTGAAAGGCCTGGGGCCAGGACGCTTGTCTGCC
ATCAATGGACTGACCATGGGGGGCCTGGAAGTGATCTCAATCACAGACAACACCCCCATCCCGCACAACGGCTGCCGTCC
CAGGAAGGCTCGGAGGCTGTGA

Library Parental gene expression (RPM)
SRP051959_colon 4 .24 RPM
SRP051959_heart 5 .79 RPM
SRP051959_kidney 5 .99 RPM
SRP051959_liver 5 .07 RPM
SRP051959_lung 4 .08 RPM
SRP051959_lymph_node 4 .93 RPM
SRP051959_skeletal_muscle 9 .57 RPM
SRP051959_spleen 5 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000014967 ortholog_one2many 1 retrogene
retro_fcat_282,
Homo sapiens ENSG00000181991 ortholog_one2many 1 retrogene
retro_hsap_2458,
Gorilla gorilla ENSGGOG00000015152 ortholog_one2many 1 retrogene
retro_ggor_1531,
Macaca mulatta ENSMMUG00000013659 ortholog_one2many 1 retrogene
retro_mmul_637,
Nomascus leucogenys ENSNLEG00000011441 ortholog_one2many 1 retrogene
retro_nleu_1902,
Ochotona princeps ENSOPRG00000008247 ortholog_one2many 1 retrogene
retro_opri_540,
Pongo abelii ENSPPYG00000006751 ortholog_one2many 2 retrogenes
retro_pabe_1808, retro_pabe_2583,
Pan troglodytes ENSPTRG00000007420 ortholog_one2many 1 retrogene
retro_ptro_1419,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_2601 63.64 51.30
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2. retro_cjac_2989 87.18 100.00
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Download FASTA sequences of all ENSCJAG00000013012 retrocopies