Parental gene:

ARPC4, ENSCJAG00000016175

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:15:61707212..61720876(+)


>ENSCJAG00000016175
ATGGTGAGAGAGCCCGGTCCCGAGTTAGGGACCCCCAGCTGTTCAGCCTCAGGGCTGTGGACTGCCACTCTCCGCCCCTA
TCTGAGTGCCGTGCGGGCCACGCTGCAGGCTGCCCTCTGCCTGGAGAACTTCTCCTCCCAGGTTGTGGAACGACACAACA
AACCGGAAGTGGAAGTCAGGAGTAGCAAAGAACTCCTGTTACAACCTGTGACCATCAGCAGGAATGAGAAGGAAAAGGTT
CTGATTGAGGGCTCCATCAACTCTGTCCGGGTCAGCATTGCTGTGAAACAGGCCGATGAGATTGAGAAGATTTTATGCCA
CAAATTCATGCGCTTCATGATGATGCGAGCAGAAAACTTCTTCATCCTTCGAAGAAAGCCTGTGGAGGGGTATGACATCA
GCTTTCTGATCACCAACTTCCACACAGAGCAGATGTACAAACACAAGTTGGTGGACTTTGTGATCCACTTCATGGAGGAG
ATTGACAAGGAGATCAGTGAAATGAAGCTGTCAGTCAATGCCCGTGCCCGCATTGTGGCTGAGGAGTTCCTTAAGAATTT
TTAA

Library Parental gene expression (RPM)
SRP051959_spleen 19 .66 RPM
SRP051959_skeletal_muscle 5 .77 RPM
SRP051959_lymph_node 23 .04 RPM
SRP051959_lung 15 .57 RPM
SRP051959_liver 12 .37 RPM
SRP051959_kidney 14 .20 RPM
SRP051959_heart 8 .56 RPM
SRP051959_colon 18 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000007964 ortholog_one2one 2 retrogenes
retro_btau_680, retro_btau_849,
Myotis lucifugus ENSMLUG00000025088 ortholog_one2one 1 retrogene
retro_mluc_2078,
Monodelphis domestica ENSMODG00000005136 ortholog_one2one 1 retrogene
retro_mdom_1390,
Otolemur garnettii ENSOGAG00000026074 ortholog_one2one 2 retrogenes
retro_ogar_1033, retro_ogar_875,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1681 91.89 66.07
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Download FASTA sequences of all ENSCJAG00000016175 retrocopies