Parental gene:

CCNJ, ENSCJAG00000016259

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:12:83065871..83086264(+)


>ENSCJAG00000016259
ATGGAGCTGGAGGGGCAGTGGTGGCGAGGACAACTGGCCGCCGACATTCACCAAGCGCTTCGCTACAAGGAGCTGAAGTT
GCCCTCCTACAAAGGCCAGTCCCCTCAATTAAGTCTCAGACGGTATTTTGCTGACTTGATTGCCATTGTGAGCAATCGCT
TCACACTCTGCCCTTCTGCCCGCCATCTTGCTGTCTATTTACTGGACCTGTTTATGGACCGCTATGACATCTCTATCCAG
CAGCTGCATTTAGTTGCGCTTTCCTGCCTGCTTCTAGCAAGTAAATTTGAAGAAAAAGAAGATAGTGTGCCTAAGCTGGA
GCAGCTCAACAGCCTGGGTTGTATGACTAATATGAATCTAGTATTAACAAAACAAAATTTGCTACATATGGAACTATTAT
TATTAGAAACCTTTCAGTGGAACCTCTGCCTTCCAACAGCTGCCCATTTCATTGAGTATTATCTCTCTGAAGCAGTACAC
GAAACAGATCTTCATGATGGCTGGCCAATGATTTGCTTGGAAAAGACTAAACTCTACATGGCCAAATACGCAGATTACTT
CCTGGAAGTATCTTTGCAAGATTATGCCTTTCTAAATTATGCACCTTCTTTAGTAGCTGCTGCATGTGTGGCTTCTTCGA
GGATAATACTTCGTCTTTCTCCAACATGGCCTACGAGACTACATCGTCTTACTGCTTACTCTTGGGATTTCTTAATGCAG
TGTATTGAACGGCTATTGATCGCTCACGATAATGATGTGAAAGAAGCAAACAAACAGAGAGGACAAGCAGGACCTCAGTC
ATCACAACTAAGTATGTTCCAGACAGCCTCCCAGCCCTCACGGCCAGTTCACTTTCAGCAACCTCAGTATCTCCATCAGA
CACATCAGACCTCACTGCAGTATCGCCATCCTACATCAGAACAACCAAGCTGTCAGCAGATTGTATCGACCACACACACC
TCATCTTACACACTACAGACATGTCCTGCTGGCTTCCAAACTAGTGTTCAGGGCCTTGGGCACATGCAGACTGGTGCTGG
GATGTCACTGGCAATACCAGTAGAAGTTAAGCCCTGTCTGAGTGTTTCTTATAACCGGAGTTATCAAATAAGTGAACATT
ACCCTTGTATTACTCCATGTTTTGAAAGGTGA

Library Parental gene expression (RPM)
SRP051959_colon 6 .61 RPM
SRP051959_heart 6 .17 RPM
SRP051959_kidney 6 .61 RPM
SRP051959_liver 4 .07 RPM
SRP051959_lung 8 .26 RPM
SRP051959_lymph_node 7 .33 RPM
SRP051959_skeletal_muscle 6 .46 RPM
SRP051959_spleen 6 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Erinaceus europaeus ENSEEUG00000002270 ortholog_one2one 2 retrogenes
retro_eeur_535, retro_eeur_577,
Homo sapiens ENSG00000107443 ortholog_one2one 1 retrogene
retro_hsap_3850,
Gorilla gorilla ENSGGOG00000006034 ortholog_one2one 1 retrogene
retro_ggor_2595,
Oryctolagus cuniculus ENSOCUG00000011114 ortholog_one2one 1 retrogene
retro_ocun_425,
Tarsius syrichta ENSTSYG00000009466 ortholog_one2one 1 retrogene
retro_tsyr_741,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3274 90.79 61.88
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Download FASTA sequences of all ENSCJAG00000016259 retrocopies