Parental gene: | NLRP2, ENSCJAG00000017689 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 22:45933864..45948189(+) |
>ENSCJAG00000017689
ATGGTGTCTTCTGTGCCACTGGACTTCAACCTGCAGGCTCTTCTGGAGCAGCTCAGCCAGGATGAGTTGAGCCAGTTCAA
GTCTCTGATCAGGACCATCACCCTGGGAAATGAGCTACAGAAGATCCCCCAAACAGAGGTAGACGAGGCTGATGGGAAGC
AACTGGCAGAAATCCTCACCAGCCATTGCCCCAGCTACTGGATGGAGACGGCCACCATCCAGGTCTTTGAAAAGATGCAC
CGGGTGGATCTGTCTGAGAGAGTGAAGGATGAACTCAGAGAAGCAGCTTTGAGATCATTTAATAAAAACAAGCCTCTACC
ATTAGAGACAATACGGAAAGGAGAACCAGAGCCTGTAGACCTGGATGAAATGCTGGTGCACTTCAAGGCAGAAGCACAAG
CGTTTACAGAAACAGAGGAAGATGTCAGCAGCCTGAGAGAAGCTGAAGCCTTGAAAAAAGAAATGCCAGGGAAAGAGGAC
AGGCACAGGAGCATACTGAAGATGAAGTTCCGGCAGATGTGGGAGGCCTGGCCCGGAGCCAGCAGAGGGGTCCAAGCTGT
GGCTCAGAGATACATGACTCTGATCCCATTCAGCAACCCCAGGATACTTCCCGGGCCCTTCCCACACACGGTGGTGCTCC
ACGGCCCTGCCGGCCTTGGGAAAACCACGCTGGCCAAGAGATTAATGTTGGACTGGACAGAGGACAACCTCAGCCACAAA
TTCAAATACGCTTTCTACCTCAGCTGCAAAAGGCTCAGCCGCCTGGGCCTGTGCAGTTTTGCAGAGCTGGTCTTCAGGGA
CTGGCCGGAATTGCAGGGTGACGTTCCAGACATCCTCGCCCAAGCACAGAAAATCCTGTTCGTGGTCGACGGCCTCGATG
AGCTGGGAGCCCCACCCGGGGCGCTGATCCACGACATCTGCGGGGACTGGCTGAAGCCGAAGCCGGTGCCGGTCCTCCTG
GGGAGTTTGCTGAAGAGGAAGATGTTACCCAAGGCCGCCCTGCTGGTCACCACGCGGTCCTGGGCCCTGAGGGACCTCCG
GCCCCTGATGGAGCAGCCCATCTACATAAGGGTGGAGGGGTTCCTGGAGGAGGACAGGAGGGCCTATTTCCTGACACACT
TTGGAGAGGAGGACCAAGCCACGCGTGCCTTTGAGCTGATGAGAAGCAACGCGGCCCTGTTCCAGCTGGGCTCGGCGCCC
GCGGTGTGCTGGATGGTGTGCACGAGTCTGAAGCTGCAGATGGAGAATGGGGAGGACCCGGCCACCACCTGCCACACCCG
CACGGGGCTGTTCCTGCACTTTCTCTGCAGCCGCTTCCCGAAGGGTGCACAGCTCGGGGGCACGCTGCGGGCGCTGAGCA
TCCTGGCTGCGCAGGGCCTGTGGGCGCAGATGTCCGTGTTCCACAGAGAGGACCTGGAGAGCTTCAGGGTGCAGGAGTCC
GACCTCCGCCCGTTCCTGGACAGAGGCATCCTCCGCCAGGATAGAGACTCTAAAGACTGCTACTCCTTCCTCCACCTCAG
CTTCCAGCAGTTTTTCACTGCGCTGTTCTACGCCCTGGAGAAGGAGGAGGAGGACAGGGACGGCCACGCCTGGGACATTG
GGGATGTGCAGAGGCTGCTCTCTGGAGAAGAAAGAGTCCAGAACCCCGACCTGATCCAAGCGGGACACTTCTTATTCGGC
CTTGCCAACGAGAAGAGAGCCGCGGAGTTGGAGACCACTTTCGGCTGCGTGATGTCACGGGAGATCAAACAGGAACTGCT
GCGGTGCGACATCATTTGTGAGGAGGACAGATACTCAACCTTGACGGACCTGAAGGAGGTCTTACACTGTCTGTACGAGT
CTCAGGAGGGGGAGCTGGTGAAGGCGGTGATGGCCCCGTTGAAAGAAATATCCGTGCACTTAAGCGCTGCAGACATTGTG
CCCTCTTCCTTCTGCCTCAAGCATTGTCGGAACTTGGAGAAAATGTCACTGCAGGTGATAAAGGCAAAGCTCCCGGAGAA
TGTCACTGCCTCTGAATCAGATGCTGAGGCTGAGAGATCCCAGGATGATCAACACCTGCTTCCTTTCTGGACGGATCTTT
GTTCCGTATTTGGCTCAAACAAGGATCTAATCACTCTAGAAATCAATAATAGCTTTCTTAGTGCCTCACTGTTACGGATC
CTGTGTGAACAAATAGCTTCTGACACCTGTCATCTCCAGAGAGTGGTGATCAAAAACATCTCCCCAGCTGATGCGTATCG
GAATCTCTGCCTAGCTCTTCAAGGTCAAAAGACTGTAACATATCTAAGACTTCGAGGCAGTGCCCAGAACGATACGCTTC
CTGCACTGTGTGAGGTCCTGAGGCACCCAAAATGTAACCTGCAGTATCTCGGGTACACCTCTTCGTCATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_colon | 0 .02 RPM |
| SRP051959_heart | 0 .00 RPM |
| SRP051959_kidney | 0 .00 RPM |
| SRP051959_liver | 0 .00 RPM |
| SRP051959_lung | 0 .00 RPM |
| SRP051959_lymph_node | 0 .00 RPM |
| SRP051959_skeletal_muscle | 0 .00 RPM |
| SRP051959_spleen | 0 .06 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000015486 | ortholog_many2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000011480 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1321 | 62.30 | 71.61 | Please wait, loading  |
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| 2. | retro_cjac_3184 | 88.10 | 86.43 | Please wait, loading |
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Download FASTA sequences of all ENSCJAG00000017689 retrocopies