Parental gene: | FBLN5, ENSCJAG00000017963 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 10:117448060..117531047(-) |
>ENSCJAG00000017963
ACCCCGGCGCTCTCCCCGTGTCCTCTCCACGACTCGCTCGGCCCCAGTGGAATAAAACACCCGCGAGCCCCGAGGGCCCT
GAGGAGGCCGACTTGCCCGAGCTCCTCCGGGGGTCCCGCCCTCGAGCTTTCTTCTCGCCTTCGCATCTCCTCTTCGCGCG
TCTTGGACATGTCAGGAATAAAAAGGATACTCACTGTTACCATTGTGGCTCTCTGTCTTCCAAGCCCTGGGAATGCACAG
GCCCAGTGCACGAATGGCTTTGACCTGGATCGCCAGTCAGGACAGTGTTTAGCTGGACAGAGTCTGGCTCTGTCACCCAG
GCTGGAGTGCACTGGCAGGATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAACGATTCTCCTGCCTCAGCCTCTG
ATGGTGGGATTACAGATATCGATGAATGCCGGACCATCCCCGAGGCCTGCCGAGGAGACATGATGTGTGTTAACCAAAAT
GGCGGGTATTTATGCATCCCCCGAACAAACCCCGTGTATCGAGGGCCCTACTCGAACCCCTATTCGACCCCCTACTCAGG
TCCGTACCCAGCAGCTGCCCCACCGCTCTCAGCTCCAAACTATCCCACGATCTCCAGGCCTCTCATATGCCGCTTTGGAT
ACCAGATGGATGAAGGCAACCAGTGTGTGGATGTGGACGAGTGCGCAACAGATTCCCACCAGTGCAACCCTACCCAGATC
TGCATCAACACTGAAGGCGGGTACACCTGCTCCTGCACCGATGGATACTGGCTACTGGAAGGCCAGTGCTTAGATATTGA
TGAATGTCGCTATGGTTACTGCCAGCAGCTCTGTGCGAATGTTCCTGGATCCTACTCTTGTACATGCAACCCTGGTTTTA
CCCTCAACGAGGATGGAAGGTCTTGCCAAGATGTGAACGAGTGTGCAACTGAGAACCCCTGCGTGCAAACCTGCGTCAAC
ACCTACGGCTCTTTCATCTGCCGCTGTGACCCAGATATGAACTTGAGAAGACGGTACGGTGTTCATTGCAGTGATATGGA
CGAGTGCAGCTTCTCTGAGTTCCTCTGCCAACATGAATGTGTGAACCAGCCCGGCACATACTTCTGCTCCTGCCCTCCAG
GCTACATCCTGCTGGATGACAACCGAAGCTGCCAGGACATCAATGAATGTGAGCACAGAAACCATACGTGCAACCTGCAG
CAGACTTGCTACAATTTACAAGGGGGCTTCAAATGCATTGACCCCATCCGCTGTGAGGAGCCTTATCTGAGGATCAGTGA
TAACCGCTGTATGTGTCCTGCTGAGAACCCTGGCTGCAGAGACCAGCCCTTTACCATCTTGTACCGGGACATGGACGTGG
TGTCAGGACGCTCTGTTCCCGCTGACATCTTCCAAATGCAAGCCACAACCCGCTACCCTGGGGCCTATTACATTTTCCAG
ATCAAATCTGGGAACGAGGGCAGAGAATTTTATATGCGGCAAACGGGCCCCATCAGCGCCACCCTAGTGATGACGCGCCC
CATAAAAGGGCCCCGGGAAATCCAGCTGGACTTGGAAATGATCACTGTTAACACTGTCATCAACTTCAGAGGCAGCTCTG
TGATCCGACTGCGGATATACGTGTCGCAGTACCCATTCTGA
ACCCCGGCGCTCTCCCCGTGTCCTCTCCACGACTCGCTCGGCCCCAGTGGAATAAAACACCCGCGAGCCCCGAGGGCCCT
GAGGAGGCCGACTTGCCCGAGCTCCTCCGGGGGTCCCGCCCTCGAGCTTTCTTCTCGCCTTCGCATCTCCTCTTCGCGCG
TCTTGGACATGTCAGGAATAAAAAGGATACTCACTGTTACCATTGTGGCTCTCTGTCTTCCAAGCCCTGGGAATGCACAG
GCCCAGTGCACGAATGGCTTTGACCTGGATCGCCAGTCAGGACAGTGTTTAGCTGGACAGAGTCTGGCTCTGTCACCCAG
GCTGGAGTGCACTGGCAGGATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAACGATTCTCCTGCCTCAGCCTCTG
ATGGTGGGATTACAGATATCGATGAATGCCGGACCATCCCCGAGGCCTGCCGAGGAGACATGATGTGTGTTAACCAAAAT
GGCGGGTATTTATGCATCCCCCGAACAAACCCCGTGTATCGAGGGCCCTACTCGAACCCCTATTCGACCCCCTACTCAGG
TCCGTACCCAGCAGCTGCCCCACCGCTCTCAGCTCCAAACTATCCCACGATCTCCAGGCCTCTCATATGCCGCTTTGGAT
ACCAGATGGATGAAGGCAACCAGTGTGTGGATGTGGACGAGTGCGCAACAGATTCCCACCAGTGCAACCCTACCCAGATC
TGCATCAACACTGAAGGCGGGTACACCTGCTCCTGCACCGATGGATACTGGCTACTGGAAGGCCAGTGCTTAGATATTGA
TGAATGTCGCTATGGTTACTGCCAGCAGCTCTGTGCGAATGTTCCTGGATCCTACTCTTGTACATGCAACCCTGGTTTTA
CCCTCAACGAGGATGGAAGGTCTTGCCAAGATGTGAACGAGTGTGCAACTGAGAACCCCTGCGTGCAAACCTGCGTCAAC
ACCTACGGCTCTTTCATCTGCCGCTGTGACCCAGATATGAACTTGAGAAGACGGTACGGTGTTCATTGCAGTGATATGGA
CGAGTGCAGCTTCTCTGAGTTCCTCTGCCAACATGAATGTGTGAACCAGCCCGGCACATACTTCTGCTCCTGCCCTCCAG
GCTACATCCTGCTGGATGACAACCGAAGCTGCCAGGACATCAATGAATGTGAGCACAGAAACCATACGTGCAACCTGCAG
CAGACTTGCTACAATTTACAAGGGGGCTTCAAATGCATTGACCCCATCCGCTGTGAGGAGCCTTATCTGAGGATCAGTGA
TAACCGCTGTATGTGTCCTGCTGAGAACCCTGGCTGCAGAGACCAGCCCTTTACCATCTTGTACCGGGACATGGACGTGG
TGTCAGGACGCTCTGTTCCCGCTGACATCTTCCAAATGCAAGCCACAACCCGCTACCCTGGGGCCTATTACATTTTCCAG
ATCAAATCTGGGAACGAGGGCAGAGAATTTTATATGCGGCAAACGGGCCCCATCAGCGCCACCCTAGTGATGACGCGCCC
CATAAAAGGGCCCCGGGAAATCCAGCTGGACTTGGAAATGATCACTGTTAACACTGTCATCAACTTCAGAGGCAGCTCTG
TGATCCGACTGCGGATATACGTGTCGCAGTACCCATTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 23 .84 RPM |
| SRP051959_skeletal_muscle | 5 .98 RPM |
| SRP051959_lymph_node | 2 .35 RPM |
| SRP051959_lung | 14 .67 RPM |
| SRP051959_liver | 0 .50 RPM |
| SRP051959_kidney | 30 .11 RPM |
| SRP051959_heart | 52 .32 RPM |
| SRP051959_colon | 2 .20 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000037941 | other_paralog | 35 retrogenes |
retro_cjac_3343, retro_cjac_3355, retro_cjac_3369, retro_cjac_3372, retro_cjac_3389, retro_cjac_3391, retro_cjac_3423, retro_cjac_3425, retro_cjac_3430, retro_cjac_3445, retro_cjac_3456, retro_cjac_3474, retro_cjac_3476, retro_cjac_3477, retro_cjac_3487, retro_cjac_3491, retro_cjac_3543, retro_cjac_3545, retro_cjac_3547, retro_cjac_3549, retro_cjac_3566, retro_cjac_3583, retro_cjac_3598, retro_cjac_3609, retro_cjac_3616, retro_cjac_3622, retro_cjac_3633, retro_cjac_3641, retro_cjac_3656, retro_cjac_3672, retro_cjac_3674, retro_cjac_3677, retro_cjac_3682, retro_cjac_3733, retro_cjac_3736,
|
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3822 | 87.27 | 60.37 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_3823 | 85.67 | 58.53 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cjac_3993 | 92.10 | 60.37 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000017963 retrocopies