Parental gene:

PARL, ENSCJAG00000021241

Aliases:None
Description:presenilin associated, rhomboid-like [Source:HGNC Symbol;Acc:18253]
Organism:Marmoset (Callithrix jacchus)
Coordinates:15:5445537..5502774(-)


>ENSCJAG00000021241
ATGGCGTGGCGAGGCTGGTCGCAGCGAAGCTGGGGCTGCGGCCCGGCGTGGGCTGCGCCGGTGGGCGGCCGCGGCTGCGA
GGAGCTCACTACGGCCCTAGCCCCGCCGCGGCTGTTCGGACGCAGGTTTACCTTCGTTATTCAGCAAAAATGCGGATTCA
GAAAAGCACCCAGGAAGGTTGAACTTCGAAGATCAGACACAGGGACAAGTGGTAAAGCACACAAGAGAAGTGCTTTGATC
CCTCCTGTGGAAGAAACAGCCTTTTATCCTTCTCCCTATCCTATAAGGACTCTTATAAAACCATTATTTTTTACTGTTGG
GTTTACAGGCTGTGCATTTGGATCAGCTGCTATTTGGCAATATGAATCACTGAAATCCAGGGTCCAGAGTTATTTTGATG
GTATTAAAGCTGATTGGTTGGATAGCATAAGACCACAAAAAAAAGGAGATTTCAGAAAGGAGATTAACAAGTGGTGGAAT
AACCTAAGTGATGGCCAGCGGACTGTGACAGGTATTATAGCTGCAAATGTCCTTGTATTCTGTTTATGGAGAGTGCCATC
TCTGAAGCGGACAATGACCAGATATTTCACGTCGAATCCAGCCTCAAAGGTCCTTTGTTCTCCAATGTTGCTGTCAACAT
TCAGTCATTTCTCCTTAATTCACATGGCAGCAAATATGTATGTTTTGTGGAGCTTCTCTTCCAGCATAGTGAACCTTCTG
GGTCAAGAGCAGTTCATGGCAATGTACCTATCTGCAGGTGTTATTTCCAATTTTGTCAGTTACGTGTGTAAAGTTGCCAC
AGGAAGATATGGACCATCACTTGGTGCATCCGGTGCCATCATGACGGTCCTCGCTGCTGTCTGCACGAAGATGCCAGAAG
GGAGGCTGGCCATTATCTTCCTTCCGATACTCACGTTCACAGCAGGGAATGCCCTAAAAGCCATTATCGCCATGGACACA
GCAGGACTGATCCTGGGATGGAAAGTTTTTGATCATGCAGCACATCTTGGAGGAGCTCTTTTTGGAATATGGTATGTTAC
TTATGGTCATGAACTGATTTGGAAGAACAGGGAGCCTCTAGTGAAAATCTGGCATGAAATAAGGACTGATGGCCCCAAAA
AAGGAGGTGGCTCTAAGTAA

Library Parental gene expression (RPM)
SRP051959_colon 18 .28 RPM
SRP051959_heart 17 .61 RPM
SRP051959_kidney 15 .93 RPM
SRP051959_liver 14 .43 RPM
SRP051959_lung 14 .58 RPM
SRP051959_lymph_node 19 .54 RPM
SRP051959_skeletal_muscle 15 .37 RPM
SRP051959_spleen 15 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000014935 ortholog_one2one 1 retrogene
retro_dord_315,
Homo sapiens ENSG00000175193 ortholog_one2one 1 retrogene
retro_hsap_3526,
Gorilla gorilla ENSGGOG00000000416 ortholog_one2one 1 retrogene
retro_ggor_2384,
Mus musculus ENSMUSG00000033918 ortholog_one2one 2 retrogenes
retro_mmus_1882, retro_mmus_3526,
Nomascus leucogenys ENSNLEG00000006072 ortholog_one2one 1 retrogene
retro_nleu_491,
Otolemur garnettii ENSOGAG00000006126 ortholog_one2one 1 retrogene
retro_ogar_648,
Pan troglodytes ENSPTRG00000015673 ortholog_one2one 1 retrogene
retro_ptro_2394,
Ictidomys tridecemlineatus ENSSTOG00000023222 ortholog_one2many 1 retrogene
retro_itri_380,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1415 72.81 59.37
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2. retro_cjac_2384 72.61 62.53
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Download FASTA sequences of all ENSCJAG00000021241 retrocopies