Parental gene: | CDK4, ENSCPOG00000002670 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_9:40073416..40075344(+) |
>ENSCPOG00000002670
ATGGCTACCTCTCGATATGAGCCAGTGGCTGAAATTGGTGTTGGTGCCTATGGGACCGTGTACAAGGCTCGAGACCCCCA
CAGTGGCCACTTCGTGGCCCTCAAGAGTGTGCGAGTACCCAATGGAGGGGGAGCTGGAGGAGGCCTGCCCATCAGTACAG
TACGTGAGGTGGCCTTGCTAAGGCGGCTGGAGGCATTCGAGCATCCCAATGTTGTCCGGCTGATGGATGTCTGTGCCACT
TCTCGAACTGACCGGGAGATCAAAGTGACCCTAGTGTTTGAGCATGTAGACCAAGACCTAAGGACGTATCTCGACAAAGC
ACCGCCACCAGGCTTGCCAGTTGAAACCATCAAGGATTTGATGCGCCAGTTTCTAAGAGGCCTAGATTTTCTTCATGCCA
ACTGCATCGTTCACCGAGACCTGAAACCAGAGAATATTCTGGTGACAAGTGGTGGAACTGTGAAGCTGGCAGACTTTGGC
CTAGCCCGAATCTACAGCTACCAGATGGCCCTTACACCGGTGGTGGTTACACTCTGGTACCGGGCTCCTGAAGTTCTTCT
GCAGTCTACCTATGCAACACCAGTGGACATGTGGAGTGTTGGCTGTATTTTTGCAGAGATGTTTCGTCGAAAACCTCTCT
TCTGTGGAAACTCTGAAGCTGACCAGTTGGGCAAAATCTTTGACCTGATTGGGCTGCCTCCAGAGGATGACTGGCCACGA
GATGTATCTTTACCCCGAGGAGCCTTTTCCCCCAGAGGACCTCGTCCAGTACAGTCAGTGGTACCTGAGATGGAAGAGTC
TGGAGCACAGCTACTGCTGGAGATGCTGACATTTAACCCACACAAGCGAATCTCTGCCTTCCGAGCCCTGCAGCACTCTT
ACCTACATAAGGAAGAAGGTGACCCAGAATAA
ATGGCTACCTCTCGATATGAGCCAGTGGCTGAAATTGGTGTTGGTGCCTATGGGACCGTGTACAAGGCTCGAGACCCCCA
CAGTGGCCACTTCGTGGCCCTCAAGAGTGTGCGAGTACCCAATGGAGGGGGAGCTGGAGGAGGCCTGCCCATCAGTACAG
TACGTGAGGTGGCCTTGCTAAGGCGGCTGGAGGCATTCGAGCATCCCAATGTTGTCCGGCTGATGGATGTCTGTGCCACT
TCTCGAACTGACCGGGAGATCAAAGTGACCCTAGTGTTTGAGCATGTAGACCAAGACCTAAGGACGTATCTCGACAAAGC
ACCGCCACCAGGCTTGCCAGTTGAAACCATCAAGGATTTGATGCGCCAGTTTCTAAGAGGCCTAGATTTTCTTCATGCCA
ACTGCATCGTTCACCGAGACCTGAAACCAGAGAATATTCTGGTGACAAGTGGTGGAACTGTGAAGCTGGCAGACTTTGGC
CTAGCCCGAATCTACAGCTACCAGATGGCCCTTACACCGGTGGTGGTTACACTCTGGTACCGGGCTCCTGAAGTTCTTCT
GCAGTCTACCTATGCAACACCAGTGGACATGTGGAGTGTTGGCTGTATTTTTGCAGAGATGTTTCGTCGAAAACCTCTCT
TCTGTGGAAACTCTGAAGCTGACCAGTTGGGCAAAATCTTTGACCTGATTGGGCTGCCTCCAGAGGATGACTGGCCACGA
GATGTATCTTTACCCCGAGGAGCCTTTTCCCCCAGAGGACCTCGTCCAGTACAGTCAGTGGTACCTGAGATGGAAGAGTC
TGGAGCACAGCTACTGCTGGAGATGCTGACATTTAACCCACACAAGCGAATCTCTGCCTTCCGAGCCCTGCAGCACTCTT
ACCTACATAAGGAAGAAGGTGACCCAGAATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 23 .46 RPM |
| SRP017611_kidney | 36 .85 RPM |
| SRP017611_brain | 14 .03 RPM |
| SRP040447_lung | 44 .39 RPM |
| SRP040447_skeletal_muscle | 16 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000007160 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000006697 | possible_ortholog | 3 retrogenes | |
| Cavia porcellus | ENSCPOG00000005402 | within_species_paralog | 3 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000014245 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000014609 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000023651 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_457 | 71.56 | 71.95 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000002670 retrocopies