RetrogeneDB ID: | retro_mluc_354 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429769:21128386..21129283(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSMLUG00000025585 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CDK4 | ||
Ensembl ID: | ENSMLUG00000023651 | ||
Aliases: | None | ||
Description: | cyclin-dependent kinase 4 [Source:HGNC Symbol;Acc:1773] |
Percent Identity: | 90.94 % |
Parental protein coverage: | 98.35 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGAGGGLPVSTVREVALLRRLEAFEHPNVVRLM |
YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP.GGGAGG.LP.STV..VALLR.LEAFEHPNV.RLM | |
Retrocopy | YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPSGGGAGGALPISTVPVVALLRQLEAFEHPNVARLM |
Parental | DVCATARTDRETKVTLVFEHVDQDLRTYLDKAPPPGLPVETIKDLMRQFLRGLDFLHANCIVHRDLKPEN |
DVCATARTD.ETK.TLVFEH.DQDLRTYLDKAPPPGLP.ETIKDLMRQFLRGLDFLHANCIVHRDLKPEN | |
Retrocopy | DVCATARTDQETKATLVFEHADQDLRTYLDKAPPPGLPMETIKDLMRQFLRGLDFLHANCIVHRDLKPEN |
Parental | ILVTSSGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDLWSVGCIFAEMFRRKPLFC |
ILVTS.G.VKLADFGLARIYSY.MALTPV.VTLWYRA.EV.LQSTYATPVDLWSV.CIFA.MF..KPLFC | |
Retrocopy | ILVTSDGPVKLADFGLARIYSYRMALTPVLVTLWYRALEVHLQSTYATPVDLWSVACIFAGMFCQKPLFC |
Parental | GNSEADQLGKIFDLIGLPPEEDWPRDVSLPRGAFPPRGPCPVQSVIPEMEKSGAQLLLEMLTFNPHKRIS |
GN.EADQLGKIFDLI.LPPEE.WPRDVSLPRGAFPPRGPCPVQSV.PEME.SGAQLLLEMLTFNPHKRIS | |
Retrocopy | GNFEADQLGKIFDLIELPPEEHWPRDVSLPRGAFPPRGPCPVQSVRPEMEESGAQLLLEMLTFNPHKRIS |
Parental | AFRALQHSYLQKEEGNPE |
AFRALQHS.LQKEEGNPE | |
Retrocopy | AFRALQHSHLQKEEGNPE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000007160 | 1 retrocopy | |
Canis familiaris | ENSCAFG00000000280 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000006697 | 3 retrocopies | |
Cavia porcellus | ENSCPOG00000002670 | 1 retrocopy | |
Dasypus novemcinctus | ENSDNOG00000014245 | 1 retrocopy | |
Felis catus | ENSFCAG00000029663 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000001404 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000014609 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000003789 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000013128 | 1 retrocopy | |
Myotis lucifugus | ENSMLUG00000023651 | 2 retrocopies |
retro_mluc_1137, retro_mluc_354 ,
|
Macaca mulatta | ENSMMUG00000023694 | 1 retrocopy | |
Mus musculus | ENSMUSG00000006728 | 5 retrocopies | |
Nomascus leucogenys | ENSNLEG00000017205 | 1 retrocopy | |
Pan troglodytes | ENSPTRG00000005147 | 1 retrocopy | |
Tarsius syrichta | ENSTSYG00000011937 | 3 retrocopies |