Parental gene: | CCDC152, ENSCPOG00000002761 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_29:14121506..14146344(-) |
>ENSCPOG00000002761
AGTTCAAGCATGGATCAAAGCAGCAACGAATGTACAAAAAAGATTAGCAATGTGAATATTGACAAACTTATAAAGGATTT
CTCACAGATAGAAAAGAAAATGATAGAAACCAGTGGAAAGAATAACATACTGGAGATTCAGTTGGAAAAGACTACCTGCT
TATTAAAAGTAATTCAAACAAAGGAAACTTCATTTAAAAAAGAATGTGCTGCTCTTCATGATATGATAAAAGGGCTACAG
CAGACTATTGAATATCAACACAATTTGAAAGGTGAAAATGAAGAACTGAAAAGAAATGCTGATTTAGCAAAAGAAAAGCT
AAAATCTCAAGAGCAGGAACATATGAATAATATCGCCAAACTCGAATATGAAATGAAAATCAAAGAGGAGCAACATAAGG
TAGAAATAAGCAGACTTTATCAAGATATGCAGAAAAAAGTTGAATTAAATGAAGAAAAGCACAAAGATCTAATAAAGAAA
AAGGAGAAAGAAATTTCAGAGTTAACTGAAAAGTTACTAAGTCAAGAAAAGGAAAAGCAAAATGAAATAATCAAACTACA
GCTGGAGTTTGATGCCAAGCTAGCAAGATTTCAGACTAAATCAAAATCCTATCCAGATGCTATTTCCCCACAGAGTATCT
ACAGAAGGAAACTTCAACATCTTCAACAAGAAAAAAACAAGGAAATTGCAATTCTTCGTGATACCATTCATGATTTGGAG
CAGCGCCTTTCTATTGGCAAAGATTCTCACCTTAAGCGTAGACGGTTT
AGTTCAAGCATGGATCAAAGCAGCAACGAATGTACAAAAAAGATTAGCAATGTGAATATTGACAAACTTATAAAGGATTT
CTCACAGATAGAAAAGAAAATGATAGAAACCAGTGGAAAGAATAACATACTGGAGATTCAGTTGGAAAAGACTACCTGCT
TATTAAAAGTAATTCAAACAAAGGAAACTTCATTTAAAAAAGAATGTGCTGCTCTTCATGATATGATAAAAGGGCTACAG
CAGACTATTGAATATCAACACAATTTGAAAGGTGAAAATGAAGAACTGAAAAGAAATGCTGATTTAGCAAAAGAAAAGCT
AAAATCTCAAGAGCAGGAACATATGAATAATATCGCCAAACTCGAATATGAAATGAAAATCAAAGAGGAGCAACATAAGG
TAGAAATAAGCAGACTTTATCAAGATATGCAGAAAAAAGTTGAATTAAATGAAGAAAAGCACAAAGATCTAATAAAGAAA
AAGGAGAAAGAAATTTCAGAGTTAACTGAAAAGTTACTAAGTCAAGAAAAGGAAAAGCAAAATGAAATAATCAAACTACA
GCTGGAGTTTGATGCCAAGCTAGCAAGATTTCAGACTAAATCAAAATCCTATCCAGATGCTATTTCCCCACAGAGTATCT
ACAGAAGGAAACTTCAACATCTTCAACAAGAAAAAAACAAGGAAATTGCAATTCTTCGTGATACCATTCATGATTTGGAG
CAGCGCCTTTCTATTGGCAAAGATTCTCACCTTAAGCGTAGACGGTTT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 20 .37 RPM |
| SRP017611_kidney | 5 .44 RPM |
| SRP017611_brain | 2 .76 RPM |
| SRP040447_lung | 1 .36 RPM |
| SRP040447_skeletal_muscle | 0 .43 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Mustela putorius furo | ENSMPUG00000014443 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012867 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_311 | 66.44 | 56.64 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_638 | 63.16 | 51.17 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000002761 retrocopies