Parental gene: | SUCLG1, ENSCPOG00000003017 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_37:5976416..6004088(+) |
>ENSCPOG00000003017
ATGACCGCAGCCCTTGCCGCCGCAGCTGCCACCGCGACCATGGTGTCCGGCAGCAACGGCCTGGCCGCCGCCCGCCTTTT
GTCGCGCACCTTTTTCCTGCAACAGAATGGAATTCGACACTGTTCCTATGCAGCTTCCCGGAAGCACCTCTATGTTGATA
AAAGTACGAAGGTTATTTGCCAGGGTTTCACTGGTAAGCAGGGCACCTTTCATAGCCAGCAGGCTTTGGAATACGGCACC
AGACTCGTTGGCGGAACCACGCCAGGGAAAGGAGGCAAGCCGCACCTGGGCTTACCCGTCTTTAATACTGTGAAGGAGGC
CAAAGAGCAGACAGGAGCGACAGCCTCTGTCATTTATGTCCCTCCTCCTTTTGCTGCTGCTGCCATCGACGAAGCTGTTG
AGGCAGAAATGTCCTTGGTCGTGTGCATCACGGAAGGTATCCCGCAGCAGGACATGGTACGGGTCAAGCACAAGCTGCTC
CGCCAGGGAAAGACGAGGCTCATCGGCCCCAACTGCCCCGGAGTCATCAACCCTGGAGAATGCAAAATTGGCATCATGCC
TGGCCATATTCACAAGAAAGGAAGAGTTGGTATTGTCTCCAGGTCAGGCACCCTGACGTATGAAGCAGTTCATCAGACAA
CACAAGTTGGACTGGGACAGTCTTTGTGTGTTGGCATTGGAGGTGACCCTTTCAATGGAACAGATTTTATCGACTGCCTT
GACATCTTTCTGAGAGACTCAGGCACAGAAGGCATCATATTGATTGGTGAAATTGGTGGCAATGCAGAAGAAAATGCTGC
AGAATTTTTGAAGCAACATAACTCCGGTCCAAATGCCAAGCCTGTGGTGTCCTTCATTGCTGGTCTAACTGCTCCTCCTG
GGAGAAGAATGGGTCACGCAGGGGCCATTATTGCTGGAGGAAAAGGGGGAGCTAAGGAGAAGATTGCTGCCCTTCAGAGC
GCAGGAGTCGTGATCAGCATGTCCCCTGCGCAGCTGGGAACCACCATCTACAAGGAATTTGAAAAGAGGAAGATGCTATG
A
ATGACCGCAGCCCTTGCCGCCGCAGCTGCCACCGCGACCATGGTGTCCGGCAGCAACGGCCTGGCCGCCGCCCGCCTTTT
GTCGCGCACCTTTTTCCTGCAACAGAATGGAATTCGACACTGTTCCTATGCAGCTTCCCGGAAGCACCTCTATGTTGATA
AAAGTACGAAGGTTATTTGCCAGGGTTTCACTGGTAAGCAGGGCACCTTTCATAGCCAGCAGGCTTTGGAATACGGCACC
AGACTCGTTGGCGGAACCACGCCAGGGAAAGGAGGCAAGCCGCACCTGGGCTTACCCGTCTTTAATACTGTGAAGGAGGC
CAAAGAGCAGACAGGAGCGACAGCCTCTGTCATTTATGTCCCTCCTCCTTTTGCTGCTGCTGCCATCGACGAAGCTGTTG
AGGCAGAAATGTCCTTGGTCGTGTGCATCACGGAAGGTATCCCGCAGCAGGACATGGTACGGGTCAAGCACAAGCTGCTC
CGCCAGGGAAAGACGAGGCTCATCGGCCCCAACTGCCCCGGAGTCATCAACCCTGGAGAATGCAAAATTGGCATCATGCC
TGGCCATATTCACAAGAAAGGAAGAGTTGGTATTGTCTCCAGGTCAGGCACCCTGACGTATGAAGCAGTTCATCAGACAA
CACAAGTTGGACTGGGACAGTCTTTGTGTGTTGGCATTGGAGGTGACCCTTTCAATGGAACAGATTTTATCGACTGCCTT
GACATCTTTCTGAGAGACTCAGGCACAGAAGGCATCATATTGATTGGTGAAATTGGTGGCAATGCAGAAGAAAATGCTGC
AGAATTTTTGAAGCAACATAACTCCGGTCCAAATGCCAAGCCTGTGGTGTCCTTCATTGCTGGTCTAACTGCTCCTCCTG
GGAGAAGAATGGGTCACGCAGGGGCCATTATTGCTGGAGGAAAAGGGGGAGCTAAGGAGAAGATTGCTGCCCTTCAGAGC
GCAGGAGTCGTGATCAGCATGTCCCCTGCGCAGCTGGGAACCACCATCTACAAGGAATTTGAAAAGAGGAAGATGCTATG
A
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 120 .83 RPM |
| SRP017611_kidney | 365 .88 RPM |
| SRP017611_brain | 61 .37 RPM |
| SRP040447_lung | 71 .50 RPM |
| SRP040447_skeletal_muscle | 292 .49 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000012370 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000013405 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000003656 | ortholog_one2one | 2 retrogenes | |
| Drosophila melanogaster | FBgn0004888 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1170 | 74.59 | 50.87 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000003017 retrocopies