Parental gene: | SNAP29, ENSCPOG00000003137 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_4:17808096..17836543(+) |
>ENSCPOG00000003137
ATGTCAGCGTACCCCAGAAGCTACAACCCTTTCGACGACGATGCGGAAGACGAAGATTCGCGGCAGGCTCCGGGGAGGGA
CACCCGTGACCTCCCCGACGGACTCGCCGCGCCCACAGACCGGCAACAGTACCTGCGGCAGGAGGTGCTGCGCAGGGCGG
AGGCCACAGCAGCCAGTACCAGCCGGTCTCTGTCTCTCATGTACGAGTCCGAGAAGGTCGGGGTCGCCTCTTGTGAGGAA
TTGGTCCGGCAGCGAGGAGTCTTAGAACGCACAGAGAAGATGGTAGACAAGATGGATCAAGACTTGAAGACCAGCCAGAG
GCACATCAACAGCATTAAGAGTGTGTTTGGTGGGCTCGTCAATTACTTCAAATCCAAACCAGTAGAGACCCCAACTGAAC
AGAATGGCACGCTCACCCCGCAGACCAATAGCAGATTGAAAGAAGCCATAAGTATAAGTAAAGAACAGGAGGAAAAGTAC
CAGGCCAGCCACCCAAACCTCCGGAAGCTGGATGATGTAGATTCAGATTCCCAAACTAGCTCTTCTGTGAATACTGAAGC
TTACCCAAAAAACCCGCACCTTCGAGCCTATCATCAGAAGATTGACAGCAACCTAGATGAACTGTCCATGGGACTGGGCC
GTCTGAAGGACATTGCTCTGGGGATGCAGACAGAAATTGAGGAGCAAGATGACATTCTTGACCGACTGACAACTAAAGTG
GACAAGTTAGATATCAATATAAAAAGCACAACTCACAAGAAATTTCATTTATTA
ATGTCAGCGTACCCCAGAAGCTACAACCCTTTCGACGACGATGCGGAAGACGAAGATTCGCGGCAGGCTCCGGGGAGGGA
CACCCGTGACCTCCCCGACGGACTCGCCGCGCCCACAGACCGGCAACAGTACCTGCGGCAGGAGGTGCTGCGCAGGGCGG
AGGCCACAGCAGCCAGTACCAGCCGGTCTCTGTCTCTCATGTACGAGTCCGAGAAGGTCGGGGTCGCCTCTTGTGAGGAA
TTGGTCCGGCAGCGAGGAGTCTTAGAACGCACAGAGAAGATGGTAGACAAGATGGATCAAGACTTGAAGACCAGCCAGAG
GCACATCAACAGCATTAAGAGTGTGTTTGGTGGGCTCGTCAATTACTTCAAATCCAAACCAGTAGAGACCCCAACTGAAC
AGAATGGCACGCTCACCCCGCAGACCAATAGCAGATTGAAAGAAGCCATAAGTATAAGTAAAGAACAGGAGGAAAAGTAC
CAGGCCAGCCACCCAAACCTCCGGAAGCTGGATGATGTAGATTCAGATTCCCAAACTAGCTCTTCTGTGAATACTGAAGC
TTACCCAAAAAACCCGCACCTTCGAGCCTATCATCAGAAGATTGACAGCAACCTAGATGAACTGTCCATGGGACTGGGCC
GTCTGAAGGACATTGCTCTGGGGATGCAGACAGAAATTGAGGAGCAAGATGACATTCTTGACCGACTGACAACTAAAGTG
GACAAGTTAGATATCAATATAAAAAGCACAACTCACAAGAAATTTCATTTATTA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 5 .05 RPM |
| SRP017611_kidney | 14 .03 RPM |
| SRP017611_brain | 5 .46 RPM |
| SRP040447_lung | 7 .52 RPM |
| SRP040447_skeletal_muscle | 6 .06 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000015201 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000005913 | ortholog_one2one | 4 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000000108 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000013003 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1442 | 66.67 | 62.02 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000003137 retrocopies