Parental gene:

OTX2, ENSCPOG00000003420

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_20:3587819..3591945(+)


>ENSCPOG00000003420
ATGATGTCTTATCTTAAGCAACCGCCTTATGCAGTCAATGGGCTGAGTCTGACCACTTCGGGCATGGACTTGCTGCACCC
CTCCGTGGGCTATCCAGCCACCCCACGGAAACAGCGGCGGGAGAGGACAACCTTCACTCGGGCGCAGCTAGATGTGCTGG
AGGCGCTGTTCGCCAAGACCCGATACCCAGACATCTTCATGCGTGAGGAAGTGGCACTGAAAATCAACTTGCCTGAGTCC
AGGGTGCAGGTGTGGTTTAAGAATCGAAGAGCTAAGTGCCATGGAGGTCAAAACAAAGTGAGACCTGCCAAAAAGAAGAC
TTCTCCAGCCCGGGAAGTGAGTTCAGAGAGTGGAACGAGTGGCCAGTTCACTCCCTCCTCTAGCACCTCAGTCCCGACCA
TTGCCAGCAGCAGTGCTCCTGTGTCTATCTGGAGCCCCGCCTCCATCTCCCCACTGTCAGACCCCTTGTCCACCTCCTCC
TCCTGCATGCAGAGGTCCTATCCCATGACCTACACTCAGGCTTCAGGTTATAGTCAAGGATATGCTGGCTCAACTTCCTA
CTTTGGGGGCATGGACTGTGGATCTTATTTGACCCCTATGCACCACCAGCTTCCTGGACCAGGGGCCACACTCAGTCCCA
TGGGTACCAATGCAGTCACCAGCCATCTCAATCAGTCCCCAGCTTCTCTTTCCACCCAGGGATATGGAGCTTCAAGCTTG
GGTGGCTGTGTGAATTGTGCGACTGATTGT

Library Parental gene expression (RPM)
SRP017611_brain 0 .35 RPM
SRP017611_kidney 0 .00 RPM
SRP017611_liver 0 .00 RPM
SRP040447_lung 0 .00 RPM
SRP040447_skeletal_muscle 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000014741 ortholog_one2one 1 retrogene
retro_btau_687,
Callithrix jacchus ENSCJAG00000018583 ortholog_one2one 1 retrogene
retro_cjac_1380,
Cavia porcellus ENSCPOG00000012741 other_paralog 1 retrogene
retro_cpor_1067,
Sus scrofa ENSSSCG00000005063 ortholog_one2one 1 retrogene
retro_sscr_417,
Tursiops truncatus ENSTTRG00000004650 ortholog_one2one 1 retrogene
retro_ttru_473,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_149 57.59 72.00
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Download FASTA sequences of all ENSCPOG00000003420 retrocopies