Parental gene: | MDM2, ENSCPOG00000004323 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_9:29789368..29812963(-) |
>ENSCPOG00000004323
AGGCCAATGTGCAATACCAACATGTCTGTGTCTACTGATGGTGCTGTAAGCACCTCACAGATTCCTGCTTCGGAACAAGA
GACCCTGGTTAGACCAAAGCCATTGCTTTTGAAGTTGTTAAAATCTGTTGGTGCACAAAAAGACACTTATACTATGAAAG
AGGTCATATTTTATCTTGGCCAGTATATTATGACTAAAAGATTATATGATGAAAAACAACAACATATTGTATATTGTTCA
AATGATCTTCTAGGAGATTTGTTTGGAGTACCAAGCTTCTCTGTGAAGGAACACAGGAAAATATATACAATGATCTACAG
AAACTTGATAGTTGTCAATCAGCAGGAACCATTAGACTCTGGCACATCTGTGAGTGAGAACAGGTGTTATCTTGAAGATG
GGAGTGAACAAAAGGATCCTGGGCAAGAGCTACAAGAAGAGAGCCCTTCATCATCAGATTTGGTTTCTAGGCCATCTACC
TCATCTAGAAGGAGAGCAATTAGTGAGACAGAAGAAAATTCAGATGAATTGTCTGGTGAACGACCAAGAAAACGCCACAG
ATCAGATAGTATTTCTCTGTCTTTTGATGAAAGCCTGGCTCTGTGTGTAATAAGAGAGATACGTTGTGAAAGAAGTAATA
GCAGTGAATCGACGGAGACGCCATCAAGTCTGGATCTGGATGATGGTGTAAGTGAACATTCTGGTGATTGGTTGGATCAG
GATTCAGTGTCAGATCAATTCAGTGTAGAATTCGAAGTTGAATCTCTTGATTCAGAAGATTATAGTCTTAGTGAAGAAGG
GCAAGAACTCTCAGATGAAGATGATGAGGTATATCGAGTCACTGTGTTTAAGACAGGGGAAAGTGATACCGATTCATTTG
AAGAAGATCCTGAAATTTCCCTTGCTGACTACTGGAAGTGTACTTCATGCAATGAAATGAATCCTCCCCTTCCATCACAT
TGCAACAGATGTTGGGCCCTCCGTGAGAATTGGCTTCCTGAAGAGAAAGGGAAAGATAAAGGGGAAACCCCTGAAAAAGC
AGAGTTAAAAAACTCATCGCAGGCAGATGAGGGCTTGGATGTGCCTGATGGTAAAAAAACTTTGGCAAATGATTCCAAAG
AGTCATGTGTTGATGAAAATAATGATGAAGTCATACAAGCCTCCCAGTCACAAGAAAGTGAGGACTATTCTCAGCCATCA
ACTTCCCGTAGCCTTGTTAGTAGCAGCCAAGAAGATGTTAAAGAATTTGAGAAGGAAGAAACACAAGACAAAGAAGAAAG
TGTAGAATTTAGTTTTCCTCTTAATGCTATTGAACCTTGTGTGATTTGCCAAGGTCGACCTAAAAATGGTTGCATTGTTC
ACGGCAAAACAGGACATCTTATGTCATGTTTCACATGTGCAAAGAAGCTAAAGAAAAGAAATAAGCCCTGCCCAGTATGC
AGACAACCCATTCAAATGATCGTGCTAACTTATTTC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 16 .39 RPM |
| SRP017611_kidney | 26 .70 RPM |
| SRP017611_liver | 20 .72 RPM |
| SRP040447_lung | 47 .36 RPM |
| SRP040447_skeletal_muscle | 18 .15 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Loxodonta africana | ENSLAFG00000005885 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000034779 | ortholog_one2one | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000014702 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1234 | 66.80 | 52.24 | Please wait, loading  |
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Download FASTA sequences of all ENSCPOG00000004323 retrocopies