Parental gene: | AP1B1, ENSCPOG00000005293 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_4:13719246..13753773(+) |
>ENSCPOG00000005293
ATGACTGACTCGAAATATTTCACCACAACCAAGAAAGGGGAGATCTTCGAACTGAAGGCAGAACTCAACAGTGACAAGAA
GGAAAAGAAGAAGGAGGCAGTAAAGAAAGTGATTGCATCAATGACCGTAGGCAAAGATGTCAGTGCCCTCTTCCCTGATG
TGGTGAACTGCATGCAGACAGACAACCTGGAGCTGAAGAAGCTGGTATACCTGTACTTGATGAACTATGCCAAGAGTCAG
CCTGACATGGCCATTATGGCCGTCAACACCTTTGTGAAGGACTGCGAAGACCCCAACCCCCTCATTCGGGCCCTAGCTGT
GCGGACTATGGGTTGCATCCGAGTTGACAAGATCACAGAGTACCTGTGTGAGCCGCTCCGGAAGTGCCTGAAGGATGAGG
ACCCATATGTGCGCAAAACGGCAGCAGTGTGTGTAGCCAAACTCCATGACATCAATGCCCAACTGGTGGAGGATCAGGGC
TTCCTGGACACCCTTAAAGACCTTATCTCCGACTCCAACCCCATGGTTGTAGCAAATGCAGTGGCTGCCCTCTCAGAGAT
CGCTGAGTCTCACCCCAGTAGCAATCTGCTTGACCTGAACCCACAGTCCATCAACAAGCTGCTGACAGCCCTAAATGAGT
GCACCGAGTGGGGCCAGATCTTCATTCTGGATTGCCTAGCTAACTACACACCCAAGGACGACCGTGAGGCCCAGAGCATC
TGTGAGCGAGTCACACCCAGGCTTTCCCATGCCAACTCTGCTGTGGTGCTATCTGCTGTGAAGGTGCTGATGAAGTTCAT
GGAGATGTTGTCCAAGGACCTGGACTACTATGGCACATTGCTGAAAAAGCTGGCTCCACCTCTGGTCACACTGCTGTCAG
CTGAGCCAGAGCTGCAGTATGTGGCCCTGCGAAACATTAATCTTATCGTGCAGAAAAGGCCTGAGATCCTGAAGCACGAG
ATGAAGGTATTCTTTGTGAAGTACAATGATCCCATCTATGTGAAGCTGGAAAAGCTAGACATCATGATCCGCCTGGCTTC
CCAGGCCAACATTGCCCAGGTGTTGGCGGAGCTGAAAGAGTATGCAACAGAAGTGGATGTGGATTTTGTAAGGAAAGCTG
TGCGTGCCATTGGCCGCTGTGCCATCAAGGTGGAGCAATCTGCAGAGCGCTGTGTGAGCACACTGCTTGATCTCATCCAG
ACCAAGGTCAACTATGTGGTCCAGGAAGCCATTGTGGTCATTAAGGACATTTTCCGCAAGTACCCCAACAAGTATGAGAG
CGTGATTGCCACACTGTGTGAGAATCTCGATTCCCTGGATGAACCTGAGGCCCGGGCTGCCATGATCTGGATTGTGGGCG
AGTATGCTGAGCGGATTGACAATGCAGATGAGCTGCTGGAGAGTTTCCTTGAGGGCTTCCATGATGAAAGCACCCAGGTA
CAGCTACAACTGCTGACAGCCATTGTGAAGCTGTTTCTGAAGAAGCCAACAGAGACCCAGGAACTGGTGCAGCAGGTCCT
CAGTTTGGCCACTCAGGACTCAGACAACCCAGACCTGCGGGATCGTGGCTACATCTACTGGCGCCTGCTCTCCACCGACC
CTGTGGCTGCCAAGGAGGTAGTGCTGGCTGAGAAGCCACTCATCTCTGAAGAGACAGACCTCATTGAGCCTACACTTCTG
GATGAGCTTATCTGCTACATAGGCACCCTGGCTTCTGTATATCATAAGCCACCCAGCGCCTTTGTGGAGGGAGGCCGGGG
CGTGGTGCACAAGAGCCTGCCACCCCGTACAGCCTCGAACGAAAGCACAGAGAGCCCTGAAACAGCCCCTGCTGGAGCCC
CCACTGCTGAACAACCAGATGTCATCCCCACCCAGGGCGACCTGCTGGGAGACCTCCTCAACCTGGACCTTGGGCCCCCA
GTGAGCGGCCCACCCTTAACCACCTCCTCAGTGCAAATGGGAGCTGTGGACCTTCTTGGAGGTGGCCTTGACAGTCTGAT
TGGGGATACCAACTTTGGGGCACCCCCACCAGCAGCACCTGCCAGACTAGGAGCACCCATTGGCAGTGGCCTGAGTGACC
TCTTTGACCTGACTAGTGGTGTGGGCACCCTATCAGGATCCTATGTGCCACCCAAAGCAGTCTGGCTCCCAGCCATGAAG
GCCAAAGGGCTGGAAATCTCGGGTACCTTTATGCGCCAAGTGGGCTCCATCTCCATGGATCTGCAGTTGACCAACAAGGC
ATTGCAGGTTATGACAGACTTTGCCATCCAGTTCAACCGCAACAGCTTTGGCCTGGCCCCCGCCGCCCCCCTCCAGGTGC
ATGCACCACTCAGCCCCAACCAGACTGTGGAGATCTCCCTGCCTCTCAACACAGTGGGTTCAGTCATGAAGATGGATCCC
CTCAACAATCTCCAGGTGGCTGTGAAGAACAACATTGACATCTTCTACTTCAGCACTTTGTATCCACTGCATATCCTCTT
TGTGGAGGATGGGAAGATGGACCGACAGATGTTCCTGGCCACATGGAAAGATATTCCTAATGAGAATGAAGCCCAGTTTC
AGATCAGAGACTGCTCTCTCAATGCGGAGGCTGTGAGCACCAAGCTCCAGAACAGCAACATCTTCACCATTGCCAAGAGG
AATGTGGAGGGCCAGGACATGCTCTACCAGTCCCTGAAACTGACTAATGGCATCTGGGTACTGGCAGAGCTACGAATCCA
ACCAGGCAGTCCCAGCTTCACGCTGTCCCTGAAGTGTCGAGCACCAGAGGTGTCCCAGCACGTGTACCAGGCCTACGAGA
CCATCCTCAAGAACTGA
ATGACTGACTCGAAATATTTCACCACAACCAAGAAAGGGGAGATCTTCGAACTGAAGGCAGAACTCAACAGTGACAAGAA
GGAAAAGAAGAAGGAGGCAGTAAAGAAAGTGATTGCATCAATGACCGTAGGCAAAGATGTCAGTGCCCTCTTCCCTGATG
TGGTGAACTGCATGCAGACAGACAACCTGGAGCTGAAGAAGCTGGTATACCTGTACTTGATGAACTATGCCAAGAGTCAG
CCTGACATGGCCATTATGGCCGTCAACACCTTTGTGAAGGACTGCGAAGACCCCAACCCCCTCATTCGGGCCCTAGCTGT
GCGGACTATGGGTTGCATCCGAGTTGACAAGATCACAGAGTACCTGTGTGAGCCGCTCCGGAAGTGCCTGAAGGATGAGG
ACCCATATGTGCGCAAAACGGCAGCAGTGTGTGTAGCCAAACTCCATGACATCAATGCCCAACTGGTGGAGGATCAGGGC
TTCCTGGACACCCTTAAAGACCTTATCTCCGACTCCAACCCCATGGTTGTAGCAAATGCAGTGGCTGCCCTCTCAGAGAT
CGCTGAGTCTCACCCCAGTAGCAATCTGCTTGACCTGAACCCACAGTCCATCAACAAGCTGCTGACAGCCCTAAATGAGT
GCACCGAGTGGGGCCAGATCTTCATTCTGGATTGCCTAGCTAACTACACACCCAAGGACGACCGTGAGGCCCAGAGCATC
TGTGAGCGAGTCACACCCAGGCTTTCCCATGCCAACTCTGCTGTGGTGCTATCTGCTGTGAAGGTGCTGATGAAGTTCAT
GGAGATGTTGTCCAAGGACCTGGACTACTATGGCACATTGCTGAAAAAGCTGGCTCCACCTCTGGTCACACTGCTGTCAG
CTGAGCCAGAGCTGCAGTATGTGGCCCTGCGAAACATTAATCTTATCGTGCAGAAAAGGCCTGAGATCCTGAAGCACGAG
ATGAAGGTATTCTTTGTGAAGTACAATGATCCCATCTATGTGAAGCTGGAAAAGCTAGACATCATGATCCGCCTGGCTTC
CCAGGCCAACATTGCCCAGGTGTTGGCGGAGCTGAAAGAGTATGCAACAGAAGTGGATGTGGATTTTGTAAGGAAAGCTG
TGCGTGCCATTGGCCGCTGTGCCATCAAGGTGGAGCAATCTGCAGAGCGCTGTGTGAGCACACTGCTTGATCTCATCCAG
ACCAAGGTCAACTATGTGGTCCAGGAAGCCATTGTGGTCATTAAGGACATTTTCCGCAAGTACCCCAACAAGTATGAGAG
CGTGATTGCCACACTGTGTGAGAATCTCGATTCCCTGGATGAACCTGAGGCCCGGGCTGCCATGATCTGGATTGTGGGCG
AGTATGCTGAGCGGATTGACAATGCAGATGAGCTGCTGGAGAGTTTCCTTGAGGGCTTCCATGATGAAAGCACCCAGGTA
CAGCTACAACTGCTGACAGCCATTGTGAAGCTGTTTCTGAAGAAGCCAACAGAGACCCAGGAACTGGTGCAGCAGGTCCT
CAGTTTGGCCACTCAGGACTCAGACAACCCAGACCTGCGGGATCGTGGCTACATCTACTGGCGCCTGCTCTCCACCGACC
CTGTGGCTGCCAAGGAGGTAGTGCTGGCTGAGAAGCCACTCATCTCTGAAGAGACAGACCTCATTGAGCCTACACTTCTG
GATGAGCTTATCTGCTACATAGGCACCCTGGCTTCTGTATATCATAAGCCACCCAGCGCCTTTGTGGAGGGAGGCCGGGG
CGTGGTGCACAAGAGCCTGCCACCCCGTACAGCCTCGAACGAAAGCACAGAGAGCCCTGAAACAGCCCCTGCTGGAGCCC
CCACTGCTGAACAACCAGATGTCATCCCCACCCAGGGCGACCTGCTGGGAGACCTCCTCAACCTGGACCTTGGGCCCCCA
GTGAGCGGCCCACCCTTAACCACCTCCTCAGTGCAAATGGGAGCTGTGGACCTTCTTGGAGGTGGCCTTGACAGTCTGAT
TGGGGATACCAACTTTGGGGCACCCCCACCAGCAGCACCTGCCAGACTAGGAGCACCCATTGGCAGTGGCCTGAGTGACC
TCTTTGACCTGACTAGTGGTGTGGGCACCCTATCAGGATCCTATGTGCCACCCAAAGCAGTCTGGCTCCCAGCCATGAAG
GCCAAAGGGCTGGAAATCTCGGGTACCTTTATGCGCCAAGTGGGCTCCATCTCCATGGATCTGCAGTTGACCAACAAGGC
ATTGCAGGTTATGACAGACTTTGCCATCCAGTTCAACCGCAACAGCTTTGGCCTGGCCCCCGCCGCCCCCCTCCAGGTGC
ATGCACCACTCAGCCCCAACCAGACTGTGGAGATCTCCCTGCCTCTCAACACAGTGGGTTCAGTCATGAAGATGGATCCC
CTCAACAATCTCCAGGTGGCTGTGAAGAACAACATTGACATCTTCTACTTCAGCACTTTGTATCCACTGCATATCCTCTT
TGTGGAGGATGGGAAGATGGACCGACAGATGTTCCTGGCCACATGGAAAGATATTCCTAATGAGAATGAAGCCCAGTTTC
AGATCAGAGACTGCTCTCTCAATGCGGAGGCTGTGAGCACCAAGCTCCAGAACAGCAACATCTTCACCATTGCCAAGAGG
AATGTGGAGGGCCAGGACATGCTCTACCAGTCCCTGAAACTGACTAATGGCATCTGGGTACTGGCAGAGCTACGAATCCA
ACCAGGCAGTCCCAGCTTCACGCTGTCCCTGAAGTGTCGAGCACCAGAGGTGTCCCAGCACGTGTACCAGGCCTACGAGA
CCATCCTCAAGAACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 85 .92 RPM |
| SRP017611_kidney | 85 .63 RPM |
| SRP017611_brain | 94 .50 RPM |
| SRP040447_lung | 103 .30 RPM |
| SRP040447_skeletal_muscle | 74 .47 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000008438 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000021380 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_477 | 79.87 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000005293 retrocopies