Parental gene:

NUP43, ENSCPOG00000010815

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_60:659995..674090(+)


>ENSCPOG00000010815
ATGGAGAGTATTTGTGCGAAGTTTGTGTCTCAGAAAATCAGCAAAACCCGCTGGCGACCGTTGCCTGCCGGGAGCCTGCA
GACCGCAGAGACTTTTGCTACGGGATCTTGGGACAATGAGGACAATTATGTTTCACTGTGGTCTATTGGAGATTTTGGAA
ATTTGGACTCTGATGGAGGGTTTGAAGGAGACCACCAATTATTATGCGAAATCAGACACGGTGGTGATGTCATGGATTTA
CAGTTTTTTGACCAGGAAAGAATTGTGGCTGCTTCATCAACTGGATGTATAACAGTTTTCCTTCACCATACAAACAATCA
GACCTTATCAATCAATCAGCAGTGGAAAACAGCTCATCACCACACAAAGTCTTACAGTGCCTATAGAGGTGCACCATGCA
CAGGTATTGTGTGTGACAACCCAGAAATTGTCACAGTTGGAGAAGATGGTCGAATAAATCTCTTCAGGGTTGATCACAAG
GAAGCTGTAAGAACTATAGACAATGCAGATAGTAGTACACTCCATGCTGTAACCTTCCTTCGAACTCCTGAGATTGTTAC
AGTAAATTCAATTGGACAATTAAAAATATGGGATTTCAGACAACAAGGAAATGAGCCTGCTCAAATCTTATCACTGAATG
GTGACCGAGTGCCGCTCCACTGTGTGGACAGACATCCCAACCAGCAGCATGTTGTAGCGACAGGTGGCCAGGATGGCATG
TTGAGTATTTGGGATGTCAGACAAGGCACTATGCCTGTATCTCTGCTAAAGGCTCATGAAGCTGAAATGTGGGAAGTTCA
CTTTCATCCATCCAAACCAGATCATCTGTTTACTTGTTCTGAAGATGGATCCCTCTGGCACTGGGATGCCTCCATAGACA
TGCCGGAGAAATCCTCACTCTTTCACCAAGGAGGACGATCCAGTACATTTCTGTCTCAGAGCATTAGTAATCAGGCTAAT
GTTCAGCAGTCTATAAGTTCCTGGCTCAGCACTGATCCTGCAAAAGACCGAATTGAGATCACAAGCTTGCTTCCTACCAG
GACTCTTTCTGTGAACAGTTTGGATGTTTTAGGTCCTTGTCTTGTTTGTGGAACTGATGCAGAAGCAATTTATGTTACCA
GACAACTATTTTCATGA

Library Parental gene expression (RPM)
SRP017611_brain 4 .49 RPM
SRP017611_kidney 7 .43 RPM
SRP017611_liver 8 .27 RPM
SRP040447_lung 11 .70 RPM
SRP040447_skeletal_muscle 7 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000009426 ortholog_one2one 1 retrogene
retro_chof_1765,
Macaca mulatta ENSMMUG00000009830 ortholog_one2many 1 retrogene
retro_mmul_1962,
Monodelphis domestica ENSMODG00000016808 ortholog_one2many 2 retrogenes
retro_mdom_199, retro_mdom_353,
Ictidomys tridecemlineatus ENSSTOG00000013449 ortholog_one2one 1 retrogene
retro_itri_990,
Tarsius syrichta ENSTSYG00000000944 ortholog_one2one 1 retrogene
retro_tsyr_267,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_481 93.44 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCPOG00000010815 retrocopies