Parental gene: | NUP43, ENSCPOG00000010815 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_60:659995..674090(+) |
>ENSCPOG00000010815
ATGGAGAGTATTTGTGCGAAGTTTGTGTCTCAGAAAATCAGCAAAACCCGCTGGCGACCGTTGCCTGCCGGGAGCCTGCA
GACCGCAGAGACTTTTGCTACGGGATCTTGGGACAATGAGGACAATTATGTTTCACTGTGGTCTATTGGAGATTTTGGAA
ATTTGGACTCTGATGGAGGGTTTGAAGGAGACCACCAATTATTATGCGAAATCAGACACGGTGGTGATGTCATGGATTTA
CAGTTTTTTGACCAGGAAAGAATTGTGGCTGCTTCATCAACTGGATGTATAACAGTTTTCCTTCACCATACAAACAATCA
GACCTTATCAATCAATCAGCAGTGGAAAACAGCTCATCACCACACAAAGTCTTACAGTGCCTATAGAGGTGCACCATGCA
CAGGTATTGTGTGTGACAACCCAGAAATTGTCACAGTTGGAGAAGATGGTCGAATAAATCTCTTCAGGGTTGATCACAAG
GAAGCTGTAAGAACTATAGACAATGCAGATAGTAGTACACTCCATGCTGTAACCTTCCTTCGAACTCCTGAGATTGTTAC
AGTAAATTCAATTGGACAATTAAAAATATGGGATTTCAGACAACAAGGAAATGAGCCTGCTCAAATCTTATCACTGAATG
GTGACCGAGTGCCGCTCCACTGTGTGGACAGACATCCCAACCAGCAGCATGTTGTAGCGACAGGTGGCCAGGATGGCATG
TTGAGTATTTGGGATGTCAGACAAGGCACTATGCCTGTATCTCTGCTAAAGGCTCATGAAGCTGAAATGTGGGAAGTTCA
CTTTCATCCATCCAAACCAGATCATCTGTTTACTTGTTCTGAAGATGGATCCCTCTGGCACTGGGATGCCTCCATAGACA
TGCCGGAGAAATCCTCACTCTTTCACCAAGGAGGACGATCCAGTACATTTCTGTCTCAGAGCATTAGTAATCAGGCTAAT
GTTCAGCAGTCTATAAGTTCCTGGCTCAGCACTGATCCTGCAAAAGACCGAATTGAGATCACAAGCTTGCTTCCTACCAG
GACTCTTTCTGTGAACAGTTTGGATGTTTTAGGTCCTTGTCTTGTTTGTGGAACTGATGCAGAAGCAATTTATGTTACCA
GACAACTATTTTCATGA
ATGGAGAGTATTTGTGCGAAGTTTGTGTCTCAGAAAATCAGCAAAACCCGCTGGCGACCGTTGCCTGCCGGGAGCCTGCA
GACCGCAGAGACTTTTGCTACGGGATCTTGGGACAATGAGGACAATTATGTTTCACTGTGGTCTATTGGAGATTTTGGAA
ATTTGGACTCTGATGGAGGGTTTGAAGGAGACCACCAATTATTATGCGAAATCAGACACGGTGGTGATGTCATGGATTTA
CAGTTTTTTGACCAGGAAAGAATTGTGGCTGCTTCATCAACTGGATGTATAACAGTTTTCCTTCACCATACAAACAATCA
GACCTTATCAATCAATCAGCAGTGGAAAACAGCTCATCACCACACAAAGTCTTACAGTGCCTATAGAGGTGCACCATGCA
CAGGTATTGTGTGTGACAACCCAGAAATTGTCACAGTTGGAGAAGATGGTCGAATAAATCTCTTCAGGGTTGATCACAAG
GAAGCTGTAAGAACTATAGACAATGCAGATAGTAGTACACTCCATGCTGTAACCTTCCTTCGAACTCCTGAGATTGTTAC
AGTAAATTCAATTGGACAATTAAAAATATGGGATTTCAGACAACAAGGAAATGAGCCTGCTCAAATCTTATCACTGAATG
GTGACCGAGTGCCGCTCCACTGTGTGGACAGACATCCCAACCAGCAGCATGTTGTAGCGACAGGTGGCCAGGATGGCATG
TTGAGTATTTGGGATGTCAGACAAGGCACTATGCCTGTATCTCTGCTAAAGGCTCATGAAGCTGAAATGTGGGAAGTTCA
CTTTCATCCATCCAAACCAGATCATCTGTTTACTTGTTCTGAAGATGGATCCCTCTGGCACTGGGATGCCTCCATAGACA
TGCCGGAGAAATCCTCACTCTTTCACCAAGGAGGACGATCCAGTACATTTCTGTCTCAGAGCATTAGTAATCAGGCTAAT
GTTCAGCAGTCTATAAGTTCCTGGCTCAGCACTGATCCTGCAAAAGACCGAATTGAGATCACAAGCTTGCTTCCTACCAG
GACTCTTTCTGTGAACAGTTTGGATGTTTTAGGTCCTTGTCTTGTTTGTGGAACTGATGCAGAAGCAATTTATGTTACCA
GACAACTATTTTCATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 8 .27 RPM |
| SRP017611_kidney | 7 .43 RPM |
| SRP017611_brain | 4 .49 RPM |
| SRP040447_lung | 11 .70 RPM |
| SRP040447_skeletal_muscle | 7 .08 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000009426 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000009830 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000016808 | ortholog_one2many | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000013449 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000000944 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_481 | 93.44 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000010815 retrocopies