Parental gene:

TBPL1, ENSCPOG00000011899

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_41:13793293..13797639(+)


>ENSCPOG00000011899
ATGGATGCAGACAGTGATGTTGCATTGGACATTTTAATTACAAATGTAGTCTGTGTTTTTAGAACAAGATGCCATTTGAA
CTTAAGGAAGATTGCTTTGGAGGGAGCAAATGTCATTTATAAGCGTGATGTTGGAAAAGTATTAATGAAGCTTAGAAAAC
CTAGAATTACAGCTACAATTTGGTCCTCAGGAAAAATTATTTGCACTGGAGCAACAAGTGAAGAAGAAGCTAAATTTGGT
GCCAGGCGTTTAGCCCGCAGTCTGCAGAAACTAGGTTTTCAGGTAATATTTACAGATTTTAAGGTTGTTAACGTTTTGGC
AGTTTGTAATATGCCCTTTGAAATCCGTTTGCCAGAATTTACAAAGAACAATAGACCTCATGCCAGTTATGAACCTGAAC
TTCATCCTGCTGTGTGTTACCGGATAAAATCCCTAAGAGCTACATTACAGATCTTTTCAACAGGAAGTATCACAGTGACA
GGTAATCTG

Library Parental gene expression (RPM)
SRP017611_liver 4 .05 RPM
SRP017611_kidney 3 .98 RPM
SRP017611_brain 9 .03 RPM
SRP040447_lung 4 .69 RPM
SRP040447_skeletal_muscle 1 .72 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000007544 ortholog_one2one 1 retrogene
retro_chof_469,
Echinops telfairi ENSETEG00000015892 ortholog_one2one 1 retrogene
retro_etel_1883,
Monodelphis domestica ENSMODG00000017515 ortholog_one2one 1 retrogene
retro_mdom_1220,
Otolemur garnettii ENSOGAG00000006622 ortholog_one2one 2 retrogenes
retro_ogar_1508, retro_ogar_1509,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_575 80.65 75.46
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Download FASTA sequences of all ENSCPOG00000011899 retrocopies