Parental gene: | API5, ENSCPOG00000011993 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_72:3427366..3449056(+) |
>ENSCPOG00000011993
ATGCCGACGGTGGAGGAGCTTTACCGCAACTATGGCATCCTCGCCGATGCCACGGAGCAAGTGAGCCAGCATAAAGATGC
CTATCAAGTAATACTGGATGGTGTGAAAGGGGGTACCAAGGAAAAACGATTAGCAGCTCAGTTTATTCCTAAATTCTTCA
AGCATTTTCCTGAATTGGCAGATTCTGCTATCAATGCACAGTTAGACCTCTGTGAAGATGAAGATGTATCAATTCGACGC
CAAGCAATTAAAGAGCTGCCTCAGTTTGCCACGGGAGAAAATCTTCCCCGAGTAGCAGATATACTAACTCAACTTTTGCA
GACAGATGACTCTGCAGAATTTAACTTAGTGAACAATGCCCTGTTAAGTATATTTAAGATGGATGCAAAAGGAACTTTAG
GCGGCTTGTTCAGCCAGATACTACAAGGAGAGGACATTGTTAGAGAACGAGCAATTAAATTCCTTTCTACAAAACTTAAG
ACTTTACCAGATGAAGTCTTAACGAAGGAAGTAGAAGAACTTATACTAACTGAATCCAAAAAGGTCCTAGAAGATGTGAC
TGGTGAAGAATTTGTTCTGTTCATGAAGATACTGTCTGGATTGAAAAGCTTACAGACAGTGAGTGGGAGACAGCAGTTGG
TAGAGCTGGTGGCCGAGCAGGCCGACCTGGAGCAGACCTTCAATCCTTCAGACCCTGACTGCGTGGACAGGCTCCTACAG
TGCACTCGACAGGCAGTACCCCTCTTCTCTAAAAATGTCCATTCCACAAGGTTTGTGACTTATTTCTGTGAGCAAGTTCT
CCCTAACCTCAGTACCTTGACTACCCCAGTGGAGGGTCTTGATATACAATTGGAGGTATTAAAATTGTTGGCAGAAATGA
GTTCATTTTGTGGTGACATGGAGAAGCTAGAAACAAATTTAAGGAAACTATTTGATAAGTTATTGGAGTACATGCCTCTT
CCACCAGAAGAAGCAGAAAATGGGGAGAATGCTGGTAATGAAGAACCCAAATTGCAGTTCAGTTATGTGGAGTGTTTGTT
ATACAGTTTTCATCAGTTGGGCCGAAAACTCCCAGATTTCTTAACAGCCAAACTGAATGCAGAAAAGCTCAAAGATTTCA
AAATCAGGCTGCAGTACTTTGCCCGGGGCTTGCAGGTTTATATCAGACAGCTTCGATTGGCTCTCCAGGGTAAAACAGGC
GAGGCCTTAAAAACTGAAGAGAACAAGATTAAAGTTGTTGCATTGAAAATAACAAACAATATCAATGTTTTAATCAAGGA
TCTCTTCCACATTCCTCCTTCTTATAAAAGTACAGTGACATTGTCTTGGAAACCTGTACAGAAAGTTGAGATTGGGCAAA
AGAGAGCCAATGAAGATACAACGTCAGGTTCACCACCCAAGAAATCTGCAGCAGGACCAAAAAGAGATGCCAGGCAGATT
TATAATCCCCCCAGTGGGAAATACAGCAGCAACTTGGGCAACTTTAATTATGAGAGGAGCCTTCAGGGGAAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 25 .65 RPM |
| SRP017611_kidney | 29 .21 RPM |
| SRP017611_liver | 28 .12 RPM |
| SRP040447_lung | 32 .16 RPM |
| SRP040447_skeletal_muscle | 15 .96 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000013546 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000008827 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000027193 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000003345 | possible_ortholog | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000012428 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_861 | 90.77 | 79.17 | Please wait, loading  |
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Download FASTA sequences of all ENSCPOG00000011993 retrocopies