Parental gene: | AMZ2, ENSCPOG00000013061 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_71:1529311..1536229(-) |
>ENSCPOG00000013061
ATGCAGATAGTACAACACTCGCAACAGACACTCAAAACAGCTCTCATCTCAAAGAACCCAAAGCTTGTATCACAGTATGA
GAAGTTAGATGCTAGGGAGCAGCGTTTAATGAATGAAGCCTTCCAACCAGCCAGTGAGCTCTTTGGACCTATCACCTTGC
ATTCACAGTCAGATTGGATCACCTCCCACCCTGAGGCACCTCAGGACTTCGAAGCGTTTTTCAGTAATCCCTACCGAAAG
ACACCCTCTCCAGAGAAACACAGTATTTATATACAGTCCATCGGAGCTCTAGGAAACACTAGAGTTATCAGTGAAGAATA
TATTAAATGGCTCAAGGGCTACTGTGAAGCATTTTTCTATGGCCTGAAAGTGAAACTCCTGGAACCAGTTTCTGTTTCTG
CAACTAGGTGTTCCTTTAGAGTCAATGATCATACGCACAATCTACAAATTCATGCAGGGCAGATCTTGAATTTCTTGAAA
AAGAAGAAGCCTAACGATGCCTTCTGTGTTGTGGGAATAACTATGATTGATCTTTACCCAAGAGACTCATGGAATTTCGT
CTTTGGGCAAGCCTCTCTGACAGATGGTGTGGGGATATTCAGCTTTGCCAGGTATGGCAGGGATTTCTATACCTCGCACT
ATGAAGGCAAAGTGAAGAAACTCCAGAAAAAATCTTCCAATGACTACTCCATTTTCGATAACTATTGCGTTCCTGAAGTC
ACTAGTGTTTTACTGCTGCGGTCCTGTAAGACTTTAACCCATGAGATTGGGCACATATTTGGACTGCGACACTGCCAATG
GCTTACATGCCTAATGCAAGGCTCCAATCACCTGGAAGAAGCTGACCGGCGCCCTCTAAACCTTTGTCCTATCTGTTTAC
GCAAATTGCAGTGTGCTATTGGCTTCAGTATTGTAGAAAGATACAAGGCACTGGTGAGGTGGATTGATGATGAATCTTCT
GATACACCAAGAGCAACTCCAAAACATAGTCGTGAAGATAATGTGAATTTGCCAAAACCCGTGGAAGCCTTTAAGGAATG
GAAAGAGTGGATAATAAAATGCCTTGCTGTTCTCCAAAAA
ATGCAGATAGTACAACACTCGCAACAGACACTCAAAACAGCTCTCATCTCAAAGAACCCAAAGCTTGTATCACAGTATGA
GAAGTTAGATGCTAGGGAGCAGCGTTTAATGAATGAAGCCTTCCAACCAGCCAGTGAGCTCTTTGGACCTATCACCTTGC
ATTCACAGTCAGATTGGATCACCTCCCACCCTGAGGCACCTCAGGACTTCGAAGCGTTTTTCAGTAATCCCTACCGAAAG
ACACCCTCTCCAGAGAAACACAGTATTTATATACAGTCCATCGGAGCTCTAGGAAACACTAGAGTTATCAGTGAAGAATA
TATTAAATGGCTCAAGGGCTACTGTGAAGCATTTTTCTATGGCCTGAAAGTGAAACTCCTGGAACCAGTTTCTGTTTCTG
CAACTAGGTGTTCCTTTAGAGTCAATGATCATACGCACAATCTACAAATTCATGCAGGGCAGATCTTGAATTTCTTGAAA
AAGAAGAAGCCTAACGATGCCTTCTGTGTTGTGGGAATAACTATGATTGATCTTTACCCAAGAGACTCATGGAATTTCGT
CTTTGGGCAAGCCTCTCTGACAGATGGTGTGGGGATATTCAGCTTTGCCAGGTATGGCAGGGATTTCTATACCTCGCACT
ATGAAGGCAAAGTGAAGAAACTCCAGAAAAAATCTTCCAATGACTACTCCATTTTCGATAACTATTGCGTTCCTGAAGTC
ACTAGTGTTTTACTGCTGCGGTCCTGTAAGACTTTAACCCATGAGATTGGGCACATATTTGGACTGCGACACTGCCAATG
GCTTACATGCCTAATGCAAGGCTCCAATCACCTGGAAGAAGCTGACCGGCGCCCTCTAAACCTTTGTCCTATCTGTTTAC
GCAAATTGCAGTGTGCTATTGGCTTCAGTATTGTAGAAAGATACAAGGCACTGGTGAGGTGGATTGATGATGAATCTTCT
GATACACCAAGAGCAACTCCAAAACATAGTCGTGAAGATAATGTGAATTTGCCAAAACCCGTGGAAGCCTTTAAGGAATG
GAAAGAGTGGATAATAAAATGCCTTGCTGTTCTCCAAAAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 23 .07 RPM |
| SRP017611_kidney | 68 .67 RPM |
| SRP017611_brain | 95 .07 RPM |
| SRP040447_lung | 34 .45 RPM |
| SRP040447_skeletal_muscle | 71 .99 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009345 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000000493 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000000254 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000011450 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000019195 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000006771 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000014570 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000017239 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1226 | 69.63 | 53.06 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000013061 retrocopies