Parental gene:

AMZ2, ENSCPOG00000013061

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_71:1529311..1536229(-)


>ENSCPOG00000013061
ATGCAGATAGTACAACACTCGCAACAGACACTCAAAACAGCTCTCATCTCAAAGAACCCAAAGCTTGTATCACAGTATGA
GAAGTTAGATGCTAGGGAGCAGCGTTTAATGAATGAAGCCTTCCAACCAGCCAGTGAGCTCTTTGGACCTATCACCTTGC
ATTCACAGTCAGATTGGATCACCTCCCACCCTGAGGCACCTCAGGACTTCGAAGCGTTTTTCAGTAATCCCTACCGAAAG
ACACCCTCTCCAGAGAAACACAGTATTTATATACAGTCCATCGGAGCTCTAGGAAACACTAGAGTTATCAGTGAAGAATA
TATTAAATGGCTCAAGGGCTACTGTGAAGCATTTTTCTATGGCCTGAAAGTGAAACTCCTGGAACCAGTTTCTGTTTCTG
CAACTAGGTGTTCCTTTAGAGTCAATGATCATACGCACAATCTACAAATTCATGCAGGGCAGATCTTGAATTTCTTGAAA
AAGAAGAAGCCTAACGATGCCTTCTGTGTTGTGGGAATAACTATGATTGATCTTTACCCAAGAGACTCATGGAATTTCGT
CTTTGGGCAAGCCTCTCTGACAGATGGTGTGGGGATATTCAGCTTTGCCAGGTATGGCAGGGATTTCTATACCTCGCACT
ATGAAGGCAAAGTGAAGAAACTCCAGAAAAAATCTTCCAATGACTACTCCATTTTCGATAACTATTGCGTTCCTGAAGTC
ACTAGTGTTTTACTGCTGCGGTCCTGTAAGACTTTAACCCATGAGATTGGGCACATATTTGGACTGCGACACTGCCAATG
GCTTACATGCCTAATGCAAGGCTCCAATCACCTGGAAGAAGCTGACCGGCGCCCTCTAAACCTTTGTCCTATCTGTTTAC
GCAAATTGCAGTGTGCTATTGGCTTCAGTATTGTAGAAAGATACAAGGCACTGGTGAGGTGGATTGATGATGAATCTTCT
GATACACCAAGAGCAACTCCAAAACATAGTCGTGAAGATAATGTGAATTTGCCAAAACCCGTGGAAGCCTTTAAGGAATG
GAAAGAGTGGATAATAAAATGCCTTGCTGTTCTCCAAAAA

Library Parental gene expression (RPM)
SRP017611_brain 95 .07 RPM
SRP017611_kidney 68 .67 RPM
SRP017611_liver 23 .07 RPM
SRP040447_lung 34 .45 RPM
SRP040447_skeletal_muscle 71 .99 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000009345 ortholog_one2one 1 retrogene
retro_btau_429,
Choloepus hoffmanni ENSCHOG00000000493 ortholog_one2one 1 retrogene
retro_chof_2462,
Callithrix jacchus ENSCJAG00000000254 ortholog_one2one 1 retrogene
retro_cjac_2798,
Equus caballus ENSECAG00000011450 ortholog_one2one 2 retrogenes
retro_ecab_440, retro_ecab_864,
Felis catus ENSFCAG00000019195 ortholog_one2one 1 retrogene
retro_fcat_760,
Myotis lucifugus ENSMLUG00000006771 ortholog_one2one 2 retrogenes
retro_mluc_1540, retro_mluc_2056,
Mustela putorius furo ENSMPUG00000014570 ortholog_one2one 1 retrogene
retro_mputfur_1224,
Pteropus vampyrus ENSPVAG00000017239 ortholog_one2one 2 retrogenes
retro_pvam_1453, retro_pvam_989,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1226 69.63 53.06
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Download FASTA sequences of all ENSCPOG00000013061 retrocopies