Parental gene:

SEPT2, ENSCPOG00000013687

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_13:23019865..23048676(-)


>ENSCPOG00000013687
ATTTGTAAGCAACAACCGGCTCAGTTTATAAATCCAGAAACTCCTGGTTATGTTGGATTTGCAAACCTTCCCAATCAAGT
TCACCGAAAATCAGTGAAAAAAGGTTTTGAATTCACGCTGATGGTGGTTGGTGAGTCAGGCCTGGGAAAATCAACTCTGA
TAAACAGCCTGTTCCTGACTGATCTCTATCCAGAAAGAATCATACCTGGAGCTGCAGAGAAAATTGAAAGAACTGTCCAA
ATTGAAGCTTCAACTGTGGAGATTGAAGAGCGTGGAGTTAAACTGCGCCTTACAGTAGTGGATACACCTGGCTATGGGGA
TGCTATCAATTGCAGGGATTGTTTTAAGACCATCATCTCCTACATTGATGAGCAGTTTGAACGCTACCTGCATGATGAGA
GTGGCTTAAACAGGCGCCACATCATTGACAACAGGGTACATTGCTGCTTCTACTTCATTTCACCTTTTGGACATGGGCTG
AAGCCTTTAGATGTTGCATTTATGAAAGCAATACACAACAAGGTAAATATTGTGCCAGTCATTGCGAAAGCTGACACTCT
CACTCTGAAGGAGCGCGAGCGACTGAAGAAAAGAATTCTGGATGAAATTGAAGAACATAACATCAAAATCTATCACTTAC
CTGATGCAGAATCAGATGAAGATGAAGACTTTAAAGAGCAGACTAGGCTTCTCAAGGCCAGTATCCCATTCTCTGTGGTT
GGATCCAACCAGTTGATTGAAGCCAAAGGCAAGAAGGTCAGAGGTCGCCTCTATCCATGGGGTGTTGTGGAGGTGGAGAA
CCCAGAACATAATGATTTTCTGAAGCTAAGAACGATGCTTATTACCCACATGCAAGATCTACAGGAAGTGACTCAGGACC
TTCACTATGAAAACTTCCGTTCTGAGAGGCTTAAGAGAGGTGGCAGGAAAGTAGAAAATGAGGATATGAATAAAGATCAG
ATCCTGCTGGAAAAGGAAGCGGAGCTCCGCCGCATGCAAGAGATGATCGCAAGGATGCAGGCACAGATGCAGTTGCAGAT
GCAGGGTGGTGATGGTGACAGTGGAGCTCTTGGGCACCATGTGTGA

Library Parental gene expression (RPM)
SRP017611_brain 38 .59 RPM
SRP017611_kidney 49 .41 RPM
SRP017611_liver 27 .03 RPM
SRP040447_lung 99 .87 RPM
SRP040447_skeletal_muscle 39 .21 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002608 ortholog_one2one 1 retrogene
retro_btau_1185,
Canis familiaris ENSCAFG00000012960 ortholog_one2one 1 retrogene
retro_cfam_1477,
Choloepus hoffmanni ENSCHOG00000008715 ortholog_one2one 5 retrogenes
retro_chof_1371, retro_chof_1579, retro_chof_2198, retro_chof_275, retro_chof_614,
Callithrix jacchus ENSCJAG00000006122 ortholog_one2one 1 retrogene
retro_cjac_1501,
Loxodonta africana ENSLAFG00000011964 ortholog_one2many 1 retrogene
retro_lafr_4,
Macropus eugenii ENSMEUG00000016519 ortholog_one2many 1 retrogene
retro_meug_39,
Myotis lucifugus ENSMLUG00000007108 ortholog_one2one 1 retrogene
retro_mluc_1594,
Monodelphis domestica ENSMODG00000016041 ortholog_one2one 1 retrogene
retro_mdom_888,
Mustela putorius furo ENSMPUG00000000166 ortholog_one2one 1 retrogene
retro_mputfur_436,
Nomascus leucogenys ENSNLEG00000013873 ortholog_one2one 1 retrogene
retro_nleu_1848,
Otolemur garnettii ENSOGAG00000004457 ortholog_one2one 1 retrogene
retro_ogar_2239,
Pteropus vampyrus ENSPVAG00000000558 ortholog_one2one 1 retrogene
retro_pvam_448,
Rattus norvegicus ENSRNOG00000017952 ortholog_one2one 1 retrogene
retro_rnor_1110,
Ictidomys tridecemlineatus ENSSTOG00000013357 ortholog_one2one 1 retrogene
retro_itri_1227,
Drosophila melanogaster FBgn0011710 ortholog_one2one 1 retrogene
retro_dmel_35,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_845 84.62 67.87
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Download FASTA sequences of all ENSCPOG00000013687 retrocopies