Parental gene:

ZMAT5, ENSCPOG00000020994

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_4:13411574..13424247(+)


>ENSCPOG00000020994
ATGGGGAAGCGATACTTCTGTGACTACTGTGACCGCTCCTTCCAGGATAACCTCCACAACCGAAAGAAGCACCTGAATGG
GCTACAGCACCTCAAGGCCAAGAAGATGTGGTACGACATGTTCAGAGATGCGGCTGCCATCTTGCTGGATGAGGAAAACA
AGCGACCCTGCAGGAAGTTCCTGCTGACAGGCCAATGTGACTTTGGCTCCAATTGCAGATTTTCCCATATGTCGGAGCAA
GACCTACAGGAGCTGAGCATCCAGGTGGAGGAGGAAAGGCGGGCCAGAGAGTGGCCATTGGAAACCCCTGAGCTCCCTGA
GGGCCATCTGGAAGACTGGCTGGAGAAGAGAGCCAAGAGGCTGAGCTCAGCCCCAAGCAGCAGGGTCGAACCTCTCAGAG
CCACCGTCTTCCAGTACCCTGTAGGCTGGCCGCCAGTCCAGGAGCTCCCCCCCTCCCTGCGGGCACCCCCACCAGGGGGC
TGGCCCCTGCAGCCCAGAGTACAGTGGGGCTGA

Library Parental gene expression (RPM)
SRP017611_brain 11 .85 RPM
SRP017611_kidney 10 .89 RPM
SRP017611_liver 8 .75 RPM
SRP040447_lung 13 .09 RPM
SRP040447_skeletal_muscle 20 .56 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008059 ortholog_one2one 1 retrogene
retro_amel_866,
Canis familiaris ENSCAFG00000012343 ortholog_one2one 2 retrogenes
retro_cfam_1130, retro_cfam_1424,
Echinops telfairi ENSETEG00000003789 ortholog_one2one 2 retrogenes
retro_etel_2098, retro_etel_421,
Felis catus ENSFCAG00000004251 ortholog_one2one 1 retrogene
retro_fcat_824,
Myotis lucifugus ENSMLUG00000017398 ortholog_one2one 1 retrogene
retro_mluc_568,
Mustela putorius furo ENSMPUG00000013253 ortholog_one2one 1 retrogene
retro_mputfur_875,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1043 70.18 99.41
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Download FASTA sequences of all ENSCPOG00000020994 retrocopies