Parental gene: | LPCAT4, ENSCPOG00000023492 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_10:18754070..18761677(+) |
>ENSCPOG00000023492
ATGCGCCAGGGCGGCCCGGGGGACTCGGCCCCCCGCGAGCCCGCCCTCGGAACCCCGGCGCTCCCCAACCCCTTCGTGCA
CGAGTTACATCTCTCCCGCCTCCAGCGGGTGAAGTTCTGCTTCCTGGGGATACTGCTGGCCCCCATCCGAGTGCTTCTGG
CCTTTGTCATCCTCTTTCTCCTCTGGCCCTTTGCCTGGCTACAAGTCGCAGGTCTTACTGAGGAGCAACTTCAGGAACCA
ATTACAGGATGGAGGAAGACTGTGTGCCACAATGGGGTGCTGAGCCTGAGCCGCCTGCTCTTTTTCCTGCTGGGCTTCCT
CCGGATCCGTGTTCGTGGCCAGCGGGCCTCTCGCCTTCAGGCTCCTGTCCTCGTTGCTGCCCCCCACTCTACTTTCTTCG
ACCCCATTGTTCTGCTGCCCTGTGACCTTCCCAAGGTTGTCTCCCGAGCCGAGAACCTTTCTGTGCCCGTCATTGGAGCC
CTTCTTCGATTCAACCAAGCCATCTTGGTGTCCCGGCATGACCCAGCTTCCCGTCGAAGAGTGGTGGAGGAGGTCCGGAG
GAGGGCCACCTCGGGAGGCAAGTGGCCCCAGGTACTATTCTTTCCCGAAGGCACCTGTTCTAACAAGAAGGCTCTGCTTA
AATTCAAACCAGGAGCCTTCATTGCAGGGGTGCCTGTGCAGCCTGTCCTCATCCGCTACCCCAATAGTCTGGATACCACC
AGCTGGGCATGGAGGGGCCCTGGAGTGCTCAAAGTGCTGTGGCTCACAGCTTCTCAGCCCTGCAGCATTGTGGATGTGGA
GTTCCTCCCCGTGTATCAGCCTAGCCCTGAGGAGAGCAGAGACCCCACCCTGTATGCCAACAATGTCCAGCGGGTCATGG
CACAGGCCCTGGGCATTCCAGCCACTGAGTGTGAGTTTGTGGGCAGCTTGCCTGTCATTGTGGTTGGCCGGCTGAAGGTA
GCTTTGGAGCCACAGCTCTGGGAGCTAGGAAAGGTGCTTCAGAAGGCAGGCTTGTCACCTGGCTGTGTGGATGCTGAGGC
AGAGCCAGGCCGGAGTCGAATGATCAGCCAGGAGGAGTTTGCCAGGCAGCTACAGCTCTTGGATCCTCAGACGGTGGCTG
GTGCCTTCAGCTACTTCCAGCAGGATGCCAGCGGTTTGGTGGACTTCCGAGATGTGGCACTCGCGCTAGCAGCTTTGGAT
GGAGGCAGGAGCCTGGAGGATCTGACTCGCCTGGCCTTTGAGCTCTTTGCTGAAGAGCAGACAGAGGGACCTGGCCGGCT
GTTGTACGAAGATGGCTTCAGCACCATCCTGCACCTGCTGCTGGGCTCGCCCCGCCCTGCTGCCACAACTCTGCATGCTG
AGCTGTGCCAGGCAGGAGCCAGCCATGGCCTCTCCCTCTGTCAGTTCCAGAACTTCTCCCTCCACGACCCGCTCTATGGG
AAGCTCTTCAGCACCTACCTGCACCCCCCACACACCGCTCGAGGCACCTGCCCCGTGCCAGGTGCCTCCCCACGCAGCCC
CCCTGCTCTGGCCAACGGGACTGTGCAGGCACCCAAGCAGAAGGGCGAC
ATGCGCCAGGGCGGCCCGGGGGACTCGGCCCCCCGCGAGCCCGCCCTCGGAACCCCGGCGCTCCCCAACCCCTTCGTGCA
CGAGTTACATCTCTCCCGCCTCCAGCGGGTGAAGTTCTGCTTCCTGGGGATACTGCTGGCCCCCATCCGAGTGCTTCTGG
CCTTTGTCATCCTCTTTCTCCTCTGGCCCTTTGCCTGGCTACAAGTCGCAGGTCTTACTGAGGAGCAACTTCAGGAACCA
ATTACAGGATGGAGGAAGACTGTGTGCCACAATGGGGTGCTGAGCCTGAGCCGCCTGCTCTTTTTCCTGCTGGGCTTCCT
CCGGATCCGTGTTCGTGGCCAGCGGGCCTCTCGCCTTCAGGCTCCTGTCCTCGTTGCTGCCCCCCACTCTACTTTCTTCG
ACCCCATTGTTCTGCTGCCCTGTGACCTTCCCAAGGTTGTCTCCCGAGCCGAGAACCTTTCTGTGCCCGTCATTGGAGCC
CTTCTTCGATTCAACCAAGCCATCTTGGTGTCCCGGCATGACCCAGCTTCCCGTCGAAGAGTGGTGGAGGAGGTCCGGAG
GAGGGCCACCTCGGGAGGCAAGTGGCCCCAGGTACTATTCTTTCCCGAAGGCACCTGTTCTAACAAGAAGGCTCTGCTTA
AATTCAAACCAGGAGCCTTCATTGCAGGGGTGCCTGTGCAGCCTGTCCTCATCCGCTACCCCAATAGTCTGGATACCACC
AGCTGGGCATGGAGGGGCCCTGGAGTGCTCAAAGTGCTGTGGCTCACAGCTTCTCAGCCCTGCAGCATTGTGGATGTGGA
GTTCCTCCCCGTGTATCAGCCTAGCCCTGAGGAGAGCAGAGACCCCACCCTGTATGCCAACAATGTCCAGCGGGTCATGG
CACAGGCCCTGGGCATTCCAGCCACTGAGTGTGAGTTTGTGGGCAGCTTGCCTGTCATTGTGGTTGGCCGGCTGAAGGTA
GCTTTGGAGCCACAGCTCTGGGAGCTAGGAAAGGTGCTTCAGAAGGCAGGCTTGTCACCTGGCTGTGTGGATGCTGAGGC
AGAGCCAGGCCGGAGTCGAATGATCAGCCAGGAGGAGTTTGCCAGGCAGCTACAGCTCTTGGATCCTCAGACGGTGGCTG
GTGCCTTCAGCTACTTCCAGCAGGATGCCAGCGGTTTGGTGGACTTCCGAGATGTGGCACTCGCGCTAGCAGCTTTGGAT
GGAGGCAGGAGCCTGGAGGATCTGACTCGCCTGGCCTTTGAGCTCTTTGCTGAAGAGCAGACAGAGGGACCTGGCCGGCT
GTTGTACGAAGATGGCTTCAGCACCATCCTGCACCTGCTGCTGGGCTCGCCCCGCCCTGCTGCCACAACTCTGCATGCTG
AGCTGTGCCAGGCAGGAGCCAGCCATGGCCTCTCCCTCTGTCAGTTCCAGAACTTCTCCCTCCACGACCCGCTCTATGGG
AAGCTCTTCAGCACCTACCTGCACCCCCCACACACCGCTCGAGGCACCTGCCCCGTGCCAGGTGCCTCCCCACGCAGCCC
CCCTGCTCTGGCCAACGGGACTGTGCAGGCACCCAAGCAGAAGGGCGAC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 3 .26 RPM |
| SRP017611_kidney | 5 .34 RPM |
| SRP017611_brain | 116 .82 RPM |
| SRP040447_lung | 12 .48 RPM |
| SRP040447_skeletal_muscle | 1 .36 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryctolagus cuniculus | ENSOCUG00000006180 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_247 | 85.97 | 63.48 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000023492 retrocopies