Parental gene: | PSMG1, ENSCPOG00000027117 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_90:3864718..3873308(+) |
>ENSCPOG00000027117
ATGGCCGCCACGTTCTTCGGAGAGGTGGTGAAAGCGCCATGCCGGACGGGCGCCGAGGACGAGGAGGAAGAAGAGGAGGA
GGCGAGGCGAGAGACGCCCGAGGATCGTGTGTTGCGGCAGCAGCTGGCGCAAAAGAGGGAGGTGCGCCTTCTTCGAAGAC
AAACAAAAACAACTCTGGAAGTTTCTCTGCTGGAAAAGTATCCCTGCTCCCAGTTTATAATTGCTGTAGGAAATAATGCA
GTAGCATTTTTGTCAGCCTTTGTTATGAACTCAGGAGTCTGGGAGGAAGTCGGTTGTGCTAAACTCTGGAATGAGTGGTG
CAGAACCACAGACACTCTGCACATGTCCCCCTCGGAGGCTCACTGTGTGTTTTACCATCTCAAATCCACCCCTTCGGTCA
TCCTCTGTCAGTGCAGTTGCTATGTCGCCGAGGACCAGCAGTATCAATGGCTGGACAAGGTTTTCGGCTCCTGTCCAAGG
AAGAACATGCAGGTGACTGTTCTCACGTGCCGACATGTCACCGACTATAAAACCTCCGAGTCTACTGGCAGCCTGCCTTC
TCCTTTCCTGAAAGCCCTGAAAACACAGAACTTCAGAGACCCTGTGTGCTGCTCCCTGCTGGAACAGCCAAATATTGTAC
ATGACCTTCCCGCGGCAGTGCTGAGCCACTGCCAGGTGTGGCGGCTGCCTGCGGTCCTGTACCTGTGCTACACTGACGTG
ATGAAGCTGGACCTCCTGACGGCCGCGGCCTTCCAGCCTGTGCTTGCCTCCAGGAGCCTGAAGGGACTGGCCAAGAACAT
TCCCCAGAGCACAGAGATTCTGAAGAGGCTGATGACGTTGAACGAGGTGCAGAGTAACATTTACACGTGA
ATGGCCGCCACGTTCTTCGGAGAGGTGGTGAAAGCGCCATGCCGGACGGGCGCCGAGGACGAGGAGGAAGAAGAGGAGGA
GGCGAGGCGAGAGACGCCCGAGGATCGTGTGTTGCGGCAGCAGCTGGCGCAAAAGAGGGAGGTGCGCCTTCTTCGAAGAC
AAACAAAAACAACTCTGGAAGTTTCTCTGCTGGAAAAGTATCCCTGCTCCCAGTTTATAATTGCTGTAGGAAATAATGCA
GTAGCATTTTTGTCAGCCTTTGTTATGAACTCAGGAGTCTGGGAGGAAGTCGGTTGTGCTAAACTCTGGAATGAGTGGTG
CAGAACCACAGACACTCTGCACATGTCCCCCTCGGAGGCTCACTGTGTGTTTTACCATCTCAAATCCACCCCTTCGGTCA
TCCTCTGTCAGTGCAGTTGCTATGTCGCCGAGGACCAGCAGTATCAATGGCTGGACAAGGTTTTCGGCTCCTGTCCAAGG
AAGAACATGCAGGTGACTGTTCTCACGTGCCGACATGTCACCGACTATAAAACCTCCGAGTCTACTGGCAGCCTGCCTTC
TCCTTTCCTGAAAGCCCTGAAAACACAGAACTTCAGAGACCCTGTGTGCTGCTCCCTGCTGGAACAGCCAAATATTGTAC
ATGACCTTCCCGCGGCAGTGCTGAGCCACTGCCAGGTGTGGCGGCTGCCTGCGGTCCTGTACCTGTGCTACACTGACGTG
ATGAAGCTGGACCTCCTGACGGCCGCGGCCTTCCAGCCTGTGCTTGCCTCCAGGAGCCTGAAGGGACTGGCCAAGAACAT
TCCCCAGAGCACAGAGATTCTGAAGAGGCTGATGACGTTGAACGAGGTGCAGAGTAACATTTACACGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 28 .77 RPM |
| SRP017611_kidney | 39 .68 RPM |
| SRP017611_brain | 15 .47 RPM |
| SRP040447_lung | 44 .21 RPM |
| SRP040447_skeletal_muscle | 40 .70 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Loxodonta africana | ENSLAFG00000015096 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1052 | 60.85 | 64.01 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000027117 retrocopies