Parental gene: | ENSDNOG00000000017 |
| Aliases: | None |
| Description: | None |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_5263:662..86483(+) |
>ENSDNOG00000000017
ATGAGTGGAAAATCTCAAGTCCACATTTTTTTTGGGGCCCCAGCTGTTCCACTGAAAATGACAGCATCACAGGAACCAGC
TTCTATAATACCCACTCCTGAGCCCTGGAGAAAAATTCAGTTTTTGTGCAGCCAGCACTCTTTACCTGTGAAGGATGACA
GCTGCAAGCACAGAAACCTTAAAGAGCAAGTCCGGGAAGCTACAGGTTCTGCAGAGCTTCTTCGTGGTGGCTTTGTGGCG
AGCTCTAGGACTAAATCTCCTCCTTTGAGAGATGACTCTCGACGCTGTATTTCTGAAGCACAGAATATAAAGTTCCAGAA
AAGTCGCTCCTCAGGGGTGAGTGATGTAGCTAACTGTGGTGTGCAGGTGCGTGAACTCGAGGGCGGAGTTCAACCTTTAA
CTGCAGGTGAAACGCCGCGACAGCTTCCGGGTGAAAATGAGATCCCAGAAGGACAGCACAGTGATCCGTCAGGTATCTGC
AGTCAGCAGTGTGAGCATCTGTCCTCCCAGGCAGCTCGTAGATACACAGCTGTTTTGGATTTGGTCTGTAGTACCAGACA
GACTAAGAGAGGGCCAGGAGCTCTAGAAGCAGAGTGTGTGCCTCATGAAATACAAAACCAGCGTCCGCAGTGCTTTCCCT
CTAGAACGGTAGATGAGCCAGGATCTAACGGAGCAGTTAGCCAGGTCTCAGCCTGTGAAGTATCTACTGACACTGAATTT
CTAAGTATACTGGCCTCCAGCCAGATTGCTCTTTTAGCTCAAAGGCAGCATAAAGGGCAGGATTCTGCAAATAAAGGAGC
CATACCCATGGAGAGTGAACCAAGGGCAAGTGAAGGGGATGAAAGGGTCACTGACGACAACCTGCCCCCATCCCGCGATG
GAGCATATGGGAACGGACAAGAGCAAGCTCATTCCCTTGAACTTTTTAGTCCTGTTTGTCCTGAAACAGTAAGTAGCCAC
ATTCACATAAATGCCGGAAAAGGTCTTGAAGAAAATACTGCATTTCAGGAACTTTTCAGTTCTGAAGATAAACTGCCTCC
CACTGAGATATGCATTGAGCCGTGTGGCTCGGGAATACTGTGCTCCCAACAGAGTGCCTTCTGTCCCAGCTCTCCCAAGA
GAAGCAGGAGCTCGGAAGAGAAACTGGGCCATTCTAAGGCTCCGTCACGAGGCCTCCCAGTATCCGAGAAAACTAAGTTG
CTGTCTCACACAGAGGATCCTGCTGTCACAGTGGGCCCGAGCAATGCCTCTGAATTCAAGCGTTTTAAAAAAACGTCATT
GATAAAAAACTGTGATTATAAAAGTTGGAAGTATAATTGTCTAGTCATGGTGTTATTGCCATGTTATGTGAAAGAAATAA
ACATAAAATCAGGACCAAGTTCTGGCTCTAAAGTACCTTTGGCAACAATGGTAGTCATAGACCAATCAGAAACGAGGAAG
AAGGTTTTTCTGTGGAGGACTGCCGCATTTTGGGCACTTACAGTGTTTCCTGGAGATATAGTTTTGCTCACAGATGTTAC
CATTCGTGAGGATCAATGGGCTGGGGATACAGTACTTCAGACAACTTTCACCAGTCAGTTATTAAATCTTGGGAGTTATT
CTTCTGTTCAGCCTGAAGAATACTCCGGTGTCGTCAGTGCCGTGGTTCTTCGAGGCTTACTGGCATATGCGTCTTCAAAG
CATCCCCACCTCGCAGCTCTTCCTCGGAGGCAGCCTCAGAACGTGAGCAGTGTGGAGTTCGTAGAGCTGGAGCGGCTTCA
GCCTGACGTTTTGGTCCATGTGATACTGAGAGTTGTAGATATCTCTGTACTAACAGAGGCATCATACAGTTACAGAGGAC
AGAAGCAGAGGAAAGCAATGCTAACGGTGGAGCAAGCCCAAGGTCAACACTACATGCTTGTCTTGTGGGGTCCTGGAGAG
GCCTGGCACCCTCAACTTCAAAGGAGAAAA
ATGAGTGGAAAATCTCAAGTCCACATTTTTTTTGGGGCCCCAGCTGTTCCACTGAAAATGACAGCATCACAGGAACCAGC
TTCTATAATACCCACTCCTGAGCCCTGGAGAAAAATTCAGTTTTTGTGCAGCCAGCACTCTTTACCTGTGAAGGATGACA
GCTGCAAGCACAGAAACCTTAAAGAGCAAGTCCGGGAAGCTACAGGTTCTGCAGAGCTTCTTCGTGGTGGCTTTGTGGCG
AGCTCTAGGACTAAATCTCCTCCTTTGAGAGATGACTCTCGACGCTGTATTTCTGAAGCACAGAATATAAAGTTCCAGAA
AAGTCGCTCCTCAGGGGTGAGTGATGTAGCTAACTGTGGTGTGCAGGTGCGTGAACTCGAGGGCGGAGTTCAACCTTTAA
CTGCAGGTGAAACGCCGCGACAGCTTCCGGGTGAAAATGAGATCCCAGAAGGACAGCACAGTGATCCGTCAGGTATCTGC
AGTCAGCAGTGTGAGCATCTGTCCTCCCAGGCAGCTCGTAGATACACAGCTGTTTTGGATTTGGTCTGTAGTACCAGACA
GACTAAGAGAGGGCCAGGAGCTCTAGAAGCAGAGTGTGTGCCTCATGAAATACAAAACCAGCGTCCGCAGTGCTTTCCCT
CTAGAACGGTAGATGAGCCAGGATCTAACGGAGCAGTTAGCCAGGTCTCAGCCTGTGAAGTATCTACTGACACTGAATTT
CTAAGTATACTGGCCTCCAGCCAGATTGCTCTTTTAGCTCAAAGGCAGCATAAAGGGCAGGATTCTGCAAATAAAGGAGC
CATACCCATGGAGAGTGAACCAAGGGCAAGTGAAGGGGATGAAAGGGTCACTGACGACAACCTGCCCCCATCCCGCGATG
GAGCATATGGGAACGGACAAGAGCAAGCTCATTCCCTTGAACTTTTTAGTCCTGTTTGTCCTGAAACAGTAAGTAGCCAC
ATTCACATAAATGCCGGAAAAGGTCTTGAAGAAAATACTGCATTTCAGGAACTTTTCAGTTCTGAAGATAAACTGCCTCC
CACTGAGATATGCATTGAGCCGTGTGGCTCGGGAATACTGTGCTCCCAACAGAGTGCCTTCTGTCCCAGCTCTCCCAAGA
GAAGCAGGAGCTCGGAAGAGAAACTGGGCCATTCTAAGGCTCCGTCACGAGGCCTCCCAGTATCCGAGAAAACTAAGTTG
CTGTCTCACACAGAGGATCCTGCTGTCACAGTGGGCCCGAGCAATGCCTCTGAATTCAAGCGTTTTAAAAAAACGTCATT
GATAAAAAACTGTGATTATAAAAGTTGGAAGTATAATTGTCTAGTCATGGTGTTATTGCCATGTTATGTGAAAGAAATAA
ACATAAAATCAGGACCAAGTTCTGGCTCTAAAGTACCTTTGGCAACAATGGTAGTCATAGACCAATCAGAAACGAGGAAG
AAGGTTTTTCTGTGGAGGACTGCCGCATTTTGGGCACTTACAGTGTTTCCTGGAGATATAGTTTTGCTCACAGATGTTAC
CATTCGTGAGGATCAATGGGCTGGGGATACAGTACTTCAGACAACTTTCACCAGTCAGTTATTAAATCTTGGGAGTTATT
CTTCTGTTCAGCCTGAAGAATACTCCGGTGTCGTCAGTGCCGTGGTTCTTCGAGGCTTACTGGCATATGCGTCTTCAAAG
CATCCCCACCTCGCAGCTCTTCCTCGGAGGCAGCCTCAGAACGTGAGCAGTGTGGAGTTCGTAGAGCTGGAGCGGCTTCA
GCCTGACGTTTTGGTCCATGTGATACTGAGAGTTGTAGATATCTCTGTACTAACAGAGGCATCATACAGTTACAGAGGAC
AGAAGCAGAGGAAAGCAATGCTAACGGTGGAGCAAGCCCAAGGTCAACACTACATGCTTGTCTTGTGGGGTCCTGGAGAG
GCCTGGCACCCTCAACTTCAAAGGAGAAAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 11 .86 RPM |
| SRP012922_cerebellum | 60 .49 RPM |
| SRP012922_heart | 12 .76 RPM |
| SRP012922_kidney | 28 .75 RPM |
| SRP012922_liver | 17 .80 RPM |
| SRP012922_lung | 27 .34 RPM |
| SRP012922_quadricep_muscle | 33 .58 RPM |
| SRP012922_spleen | 36 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000011809 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000122376 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011652 | possible_ortholog | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000002828 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000002465 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_2237 | 89.30 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000000017 retrocopies