Parental gene:

FAM35A, ENSG00000122376

Aliases:FAM35A, FAM35A1, bA163M19.1
Description:family with sequence similarity 35, member A [Source:HGNC Symbol;Acc:28773]
Organism:Human (Homo sapiens)
Coordinates:10:88853917..88951225(+)


>ENSG00000122376
ATGAGTGGAGGATCTCAAGTCCACATTTTTTGGGGTGCTCCAATTGCTCCACTGAAAATCACAGTATCAGAAGACACAGC
TTCTTTAATGTCTGTTGCTGACCCCTGGAAAAAAATTCAGCTTTTATACAGTCAACATTCTTTATATCTGAAGGATGAAA
AACAGCACAAAAATCTTGAAAACTATAAAGTCCCAGAATCTATTGGTTCTCCAGATCTTAGTGGTCATTTCTTAGCAAAC
TGTATGAATAGACATGTTCATGTGAAAGATGACTTTGTACGTTCTGTTTCTGAAACACAGAATATAGAATCCCAGAAGAT
TCACTCCTCTAGACTGAGTGATATAACTAGCTCTAATATGCAAATATGTGGATTTAAAAGCACAGTTCCGCATTTCACCG
AAGAAGAAAAGTATCAAAAGCTTCTCAGTGAAAATAAAATTAGAGATGAACAGCCTAAACATCAGCCAGATATATGTGGT
AAGAACTTTAACACAAATTTGTTTCAGTTGGGCCATAAATGTGCAGCTGTGTTGGATTTGGTTTGTAGTACTGAAAAAAT
TAATATAGGGCCTGAAGTGGTACAAAGAGAGTGTGTGCCAACAGAATATCATGAAATACAAAACCAGTGTTTGGGATTAT
TTTCCTCGAACGCAGTAGATAAGTCAAGGTCTGAAGCAGCAGTTAGGAAGGTCTCAGACCTTAAAATATCAACTGATACA
GAATTTCTCAGTATAATTACCTCCAGCCAGGTTGCTTTTTTAGCTCAAAAGAAAGATAAAAGGCGGAGTCCTGTAAATAA
AGGGAATGTAAACATGGAGACTGAACCAAAGGCAAGTTACGGGGAGATAAGAATACCTGAAGAGAATTCGATTCAGCTTG
ATGGTTTTACAGAAGCATATGAAAGTGGACAAAACCAAGCATATTCCCTTGAACTTTTTAGTCCTGTTTGTCCTAAAACA
GAAAATAGCCGCATTCACATAAACTCTGATAAAGGTCTTGAAGAACATACAGGATCTCAAGAACTTTTCAGTTCTGAAGA
TGAACTGCCACCAAATGAGATACGTATTGAGTTGTGTAGCTCAGGAATACTGTGTTCCCAACTAAATACCTTCCACAAAA
GTGCTATTAAAAGAAGCTGTACCTCTGAAGATAAAGTGGGCCAGTCTGAAGCTCTATCTAGAGTCCTTCAAGTAGCTAAG
AAAATGAAGTTGATTTCTAATGGAGGAGATTCTGCTGTAGAAATGGATCGGAGAAATGTGTCTGAATTTAAGAGTATTAA
AAAAACATCATTAATAAAAAACTGTGATTCTAAAAGCCAGAAGTATAATTGTTTAGTCATGGTGCTATCTCCATGCCATG
TGAAGGAAATAAACATAAAATTCGGACCAAATTCTGGCTCTAAAGTGCCTTTAGCAACAGTTACAGTAATTGATCAATCA
GAAACTAAGAAGAAGGTTTTTCTGTGGAGGACTGCAGCATTTTGGGCATTTACAGTGTTTCTTGGAGATATAATTTTACT
CACAGATGTTGTTATTCATGAGGACCAATGGATTGGCGAGACAGTACTACAATCAACATTTAGCAGTCAGTTATTAAATC
TTGGGAGTTATTCATCTATTCAGCCTGAAGAATATTCCAGTGTAGTTAGTGAAGTTGTACTTCAAGACTTACTGGCATAT
GTGTCCTCAAAACATTCCTACCTCAGAGATCTTCCTCCGAGGCAGCCTCAGAGGGTGAACAGTATAGACTTTGTAGAATT
GGAGCACCTTCAACCTGATGTATTAGTCCACGCAGTACTAAGAGTTGTTGATTTCACTATACTGACAGAGGCAGTATACA
GTTATAGAGGACAGAAGCAGAAAAAAGTTATGTTAACAGTGGAACAGGCCCAAGATCAACATTATGCGCTTGTATTATGG
GGTCCTGGAGCAGCCTGGTACCCTCAACTTCAAAGGAAAAAAGGAGTGGTTCTGATTAAAGCCCAGATTTCAGAGCTGGC
ATTTCCTATTACAGCATCTCAGAAGATAGCGCTAAATGCTCACAGTTCTCTGAAGAGTATTTTTTCTTCTCTTCCCAACA
TCGTATATACTGGTTGTGCAAAATGTGGATTGGAACTAGAAACAGATGAGAACAGGATCTACAAACAATGTTTTAGCTGC
TTGCCATTTACTATGAAGAAAATATATTATAGGCCAGCGTTAATGACTGCCATTGATGGAAGACATGATGTTTGTATCCG
TGTAGAATCAAAGCTGATAGAGAAGATTCTTCTCAACATTTCTGCAGACTGCCTCAACAGAGTGATAGTTCCTTCCTCAG
AGATCACCTATGGGATGGTCGTGGCAGACCTGTTCCACTCCTTGTTGGCAGTCAGCGCAGAACCTTGTGTATTAAAGATT
CAGAGCCTTTTTGTGTTAGATGAAAACAGCTATCCATTACAACAAGATTTCTCCCTCCTGGATTTTTATCCTGACATTGT
AAAGCATGGAGCCAATGCCCGTCTCTGA

Library Parental gene expression (RPM)
bodymap2_liver 43 .89 RPM
bodymap2_lung 12 .66 RPM
bodymap2_breast 47 .69 RPM
bodymap2_adipose 23 .04 RPM
bodymap2_adrenal 36 .80 RPM
bodymap2_skeletal_muscle 13 .77 RPM
bodymap2_thyroid 53 .39 RPM
bodymap2_prostate 27 .76 RPM
bodymap2_colon 20 .40 RPM
bodymap2_testis 26 .90 RPM
bodymap2_brain 12 .19 RPM
bodymap2_heart 12 .50 RPM
bodymap2_white_blood_cells 36 .40 RPM
bodymap2_lymph_node 26 .09 RPM
bodymap2_ovary 38 .80 RPM
bodymap2_kidney 51 .27 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000000017 possible_ortholog 1 retrogene
retro_dnov_2237,
Nomascus leucogenys ENSNLEG00000011652 ortholog_one2one 3 retrogenes
retro_nleu_1073, retro_nleu_2157, retro_nleu_840,
Pongo abelii ENSPPYG00000002828 ortholog_one2one 1 retrogene
retro_pabe_1137,
Pan troglodytes ENSPTRG00000002465 ortholog_one2one 1 retrogene
retro_ptro_941,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1370 91.23 75.22
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Download FASTA sequences of all ENSG00000122376 retrocopies