Parental gene: | PTPLAD1, ENSDNOG00000001687 |
| Aliases: | None |
| Description: | protein tyrosine phosphatase-like A domain containing 1 [Source:HGNC Symbol;Acc:24175] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_626:5450..85956(+) |
>ENSDNOG00000001687
ATGGAGAACCAGGTGCTGACGCCGCACGTGTACTGGGCTCAGCGACACCGCGAGCTGTATCTGCGCGTGGAGCTGAGTGA
TGTTCAGAATCCTGCCATCAGCATCACAGAAAATGTTCTACATTTCAAAGCTCAAGGACACGGTGCCAAAGGAGACAACG
TCTATGAATTTCACCTGGAGTTCTTTGACCTTGTGAAGCCAGAGCTGGTTTACAAACTGACCCAGAGGCAGGTAAACATT
ACAGTACAGAAGAAGGTGAGTCAGTGGTGGGAGCGACTCACCAAGCAGGAGAAGCGTCCACTGTTTTTGGCCCCTGACTT
TGATCGCTGGCTAGATGAGTCTGATGCAGAAATGGAGCTCAGAGCCAAGGAAGAAGAACGCCTAAATAAACTCAGACTTG
AAAGTGAAGGCTCCCCTGAAACTCTTGCAAGCTTGAAGAAAGGATACCTGTTCATGTATAATTTTGTACAGTTTTTGGGA
TTCTCCTGGATCTTTGTTAACTTGACCGTGCGATTCTTTATCTTGGGAAAAGAGTCCTTCTATGACACTTTTCACACCCT
GGCTGACATGATGTATTTCTGCCAGATGCTGGCAGCTGTGGAAACTATCAATGCAGCAATTGGAGTCACTAATTCACCAT
TATTGCCTTCTCTTATCCAGCTTCTTGGAAGAAATTTCATTTTGTTTATCATCTTTGGCACCATGGAAGAAATGCAGAAC
AGTGCTATGGTTTTCTTTGTGTTTTATCTGTGGAGTGCAATTGAAATTTTCAGGTATCCCTTTTACATGCTTTCCTGCAT
TGATATGGATTGGAAAGTGCTCACATGGCTTCGCTACACTGTGTGGATTCCCTTATATCCTCTGGGATGTTTGAGTGAAG
CTGTCTCAGTGATCCAGTCCATTCCAATATTCAATGAAACAGGAAGATTCAGCTTCACATTGCCATATCCAATGAAAATC
AAAGTTAGATTTTCCTTTTTTCTTCAGATTTATCTTATAATGTCATTTTTGGGGTTATACATAAATTTCCGTCACCTTTA
TAAACAGCGCAGGCGGCGTTATGGACAAAAAAAGAAAAAGATCCACTAA
ATGGAGAACCAGGTGCTGACGCCGCACGTGTACTGGGCTCAGCGACACCGCGAGCTGTATCTGCGCGTGGAGCTGAGTGA
TGTTCAGAATCCTGCCATCAGCATCACAGAAAATGTTCTACATTTCAAAGCTCAAGGACACGGTGCCAAAGGAGACAACG
TCTATGAATTTCACCTGGAGTTCTTTGACCTTGTGAAGCCAGAGCTGGTTTACAAACTGACCCAGAGGCAGGTAAACATT
ACAGTACAGAAGAAGGTGAGTCAGTGGTGGGAGCGACTCACCAAGCAGGAGAAGCGTCCACTGTTTTTGGCCCCTGACTT
TGATCGCTGGCTAGATGAGTCTGATGCAGAAATGGAGCTCAGAGCCAAGGAAGAAGAACGCCTAAATAAACTCAGACTTG
AAAGTGAAGGCTCCCCTGAAACTCTTGCAAGCTTGAAGAAAGGATACCTGTTCATGTATAATTTTGTACAGTTTTTGGGA
TTCTCCTGGATCTTTGTTAACTTGACCGTGCGATTCTTTATCTTGGGAAAAGAGTCCTTCTATGACACTTTTCACACCCT
GGCTGACATGATGTATTTCTGCCAGATGCTGGCAGCTGTGGAAACTATCAATGCAGCAATTGGAGTCACTAATTCACCAT
TATTGCCTTCTCTTATCCAGCTTCTTGGAAGAAATTTCATTTTGTTTATCATCTTTGGCACCATGGAAGAAATGCAGAAC
AGTGCTATGGTTTTCTTTGTGTTTTATCTGTGGAGTGCAATTGAAATTTTCAGGTATCCCTTTTACATGCTTTCCTGCAT
TGATATGGATTGGAAAGTGCTCACATGGCTTCGCTACACTGTGTGGATTCCCTTATATCCTCTGGGATGTTTGAGTGAAG
CTGTCTCAGTGATCCAGTCCATTCCAATATTCAATGAAACAGGAAGATTCAGCTTCACATTGCCATATCCAATGAAAATC
AAAGTTAGATTTTCCTTTTTTCTTCAGATTTATCTTATAATGTCATTTTTGGGGTTATACATAAATTTCCGTCACCTTTA
TAAACAGCGCAGGCGGCGTTATGGACAAAAAAAGAAAAAGATCCACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 44 .73 RPM |
| SRP012922_cerebellum | 57 .60 RPM |
| SRP012922_heart | 13 .69 RPM |
| SRP012922_kidney | 62 .15 RPM |
| SRP012922_liver | 177 .56 RPM |
| SRP012922_lung | 28 .56 RPM |
| SRP012922_quadricep_muscle | 10 .04 RPM |
| SRP012922_spleen | 48 .30 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000015087 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_54 | 82.91 | 75.41 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_352 | 78.90 | 83.15 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000001687 retrocopies