Parental gene: | VIM, ENSDNOG00000011305 |
| Aliases: | None |
| Description: | vimentin [Source:HGNC Symbol;Acc:12692] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_17048:25774..29274(-) |
>ENSDNOG00000011305
GACGTGGACAATGCTTCTCTGGCGCGTCTCGACCTTGAGCGGAAGGTGGAGTCCTTGCAGGAGGAGATTGCCTTTTTGAA
GAAACTGCATGAAGAGGAAATCCAGGAGCTGCAGGCGCAGATCCAGGAGCAGCATGTCCAGATCGACATGGACGTTTCCA
AGCCCGACCTCACGGCTGCGCTGCGCGACGTGCGCCAGCAGTACGAGAGCGTGGCTGCCAAGAACCTGCAGGAGGCCGAG
GAGTGGTACAAGTCCAAGTTTGCTGACCTGTCCGAGGCTGCCAACAGGAACAACGACGCACTGCGCCAGGCCAAGCAGGA
GTCCAACGAGTACCGGCGGCAGGTGCAGTCCCTCACCTGTGAGGTGGACGCGCTCAAAGGCACCAACGAGTCTCTGGAGC
GCCAGATGCGTGAAATGGAAGAGAATTTTGCCGTGGAAGCTGCTAACTACCAAGACACTATCGGCCGCCTGCAGGACGAG
ATTCAGAACATGCTCCGCGAATACCAGGACCTGCTGAACGTCAAGATGGCGCTGGACATCGAGATCGCCACCTACAGGAA
GCTGCTGGAGGGCGAGGAGAGCAGGATTTCTCTGCCTCTTCCAAACTTTGCTTCCCTGAACCTGAGGGAAACCAACCTGG
AGTCGCTGCCTCTCGTCGACACCCACTCCAAAAGGACACTCCTGATTAAGACGGTGGAAACTCGAGACGGGCAGGTTATC
AACGAAACTTCCCAACATCACGATGACCTTGAGTGA
GACGTGGACAATGCTTCTCTGGCGCGTCTCGACCTTGAGCGGAAGGTGGAGTCCTTGCAGGAGGAGATTGCCTTTTTGAA
GAAACTGCATGAAGAGGAAATCCAGGAGCTGCAGGCGCAGATCCAGGAGCAGCATGTCCAGATCGACATGGACGTTTCCA
AGCCCGACCTCACGGCTGCGCTGCGCGACGTGCGCCAGCAGTACGAGAGCGTGGCTGCCAAGAACCTGCAGGAGGCCGAG
GAGTGGTACAAGTCCAAGTTTGCTGACCTGTCCGAGGCTGCCAACAGGAACAACGACGCACTGCGCCAGGCCAAGCAGGA
GTCCAACGAGTACCGGCGGCAGGTGCAGTCCCTCACCTGTGAGGTGGACGCGCTCAAAGGCACCAACGAGTCTCTGGAGC
GCCAGATGCGTGAAATGGAAGAGAATTTTGCCGTGGAAGCTGCTAACTACCAAGACACTATCGGCCGCCTGCAGGACGAG
ATTCAGAACATGCTCCGCGAATACCAGGACCTGCTGAACGTCAAGATGGCGCTGGACATCGAGATCGCCACCTACAGGAA
GCTGCTGGAGGGCGAGGAGAGCAGGATTTCTCTGCCTCTTCCAAACTTTGCTTCCCTGAACCTGAGGGAAACCAACCTGG
AGTCGCTGCCTCTCGTCGACACCCACTCCAAAAGGACACTCCTGATTAAGACGGTGGAAACTCGAGACGGGCAGGTTATC
AACGAAACTTCCCAACATCACGATGACCTTGAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 180 .47 RPM |
| SRP012922_cerebellum | 30 .66 RPM |
| SRP012922_heart | 130 .17 RPM |
| SRP012922_kidney | 120 .20 RPM |
| SRP012922_liver | 31 .89 RPM |
| SRP012922_lung | 897 .41 RPM |
| SRP012922_quadricep_muscle | 195 .93 RPM |
| SRP012922_spleen | 903 .33 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000004529 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000008688 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000004937 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_72 | 50.30 | 66.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000011305 retrocopies