Parental gene: | RNF149, ENSDNOG00000011956 |
| Aliases: | None |
| Description: | ring finger protein 149 [Source:HGNC Symbol;Acc:23137] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_4924:7588..61729(-) |
>ENSDNOG00000011956
ACAGGAAATATAGTGATTATGATTAGCTACCCAAAAGGAAGAGAAATTTTGGATCTGGTGCAAAAAGGAATTCCAGTAAA
AATGTCCATTGGACTTGGCACCCGCCATGTGCAGGAGTTCGTCAGTGGTCAGTCTGTAGTGTTTGTGGCCATTGCCTTCA
TCACCATGATGATCATCTCACTAGCCTGGCTGATATTTTACTATATACAGCGTTTCCTATATACAGGCTCACAGTTTGGA
AATCAGAGCCATAGAAAAGAAACTAAGAAAGTTATTGGCCAGCTTCCACTTCATACTGTAAAGNNNNNNNNNNNNGGAAT
CAATATTGATGCTGAAAATTGTGCAGTATGTATTGAAAATTTTAAAGTAAAGGATGTTATCAGAATTCTGCCATGCAAGC
ATATTTTTCATAGAACATGCATTGACCCATGGCTTTTGGATCACCGAACTTGTCCAATGTGTAAACTTGATGTCATCAAA
GCCCTGGGATATTGGGGAGAGCCTGAGGATGTGCAGGAAATGCCTGCTTCAGAATCAACCCCTGGAAGTGCTTCTGCTGC
AAATTTGAGTACTGCTTTACAAGATGATGACAGAAGTGATAGAAACAACTTGCCATCGTCTTCCACTAATGAATCTGTGT
CACAGGTTAATGCCAGTTTTAAAGAAGATGCAGGTGAAAACACAGCATTATTAGAAACGGGCAGCAGTGACCCTCAGCGT
GGTGGACCAGTCTCCTAG
ACAGGAAATATAGTGATTATGATTAGCTACCCAAAAGGAAGAGAAATTTTGGATCTGGTGCAAAAAGGAATTCCAGTAAA
AATGTCCATTGGACTTGGCACCCGCCATGTGCAGGAGTTCGTCAGTGGTCAGTCTGTAGTGTTTGTGGCCATTGCCTTCA
TCACCATGATGATCATCTCACTAGCCTGGCTGATATTTTACTATATACAGCGTTTCCTATATACAGGCTCACAGTTTGGA
AATCAGAGCCATAGAAAAGAAACTAAGAAAGTTATTGGCCAGCTTCCACTTCATACTGTAAAGNNNNNNNNNNNNGGAAT
CAATATTGATGCTGAAAATTGTGCAGTATGTATTGAAAATTTTAAAGTAAAGGATGTTATCAGAATTCTGCCATGCAAGC
ATATTTTTCATAGAACATGCATTGACCCATGGCTTTTGGATCACCGAACTTGTCCAATGTGTAAACTTGATGTCATCAAA
GCCCTGGGATATTGGGGAGAGCCTGAGGATGTGCAGGAAATGCCTGCTTCAGAATCAACCCCTGGAAGTGCTTCTGCTGC
AAATTTGAGTACTGCTTTACAAGATGATGACAGAAGTGATAGAAACAACTTGCCATCGTCTTCCACTAATGAATCTGTGT
CACAGGTTAATGCCAGTTTTAAAGAAGATGCAGGTGAAAACACAGCATTATTAGAAACGGGCAGCAGTGACCCTCAGCGT
GGTGGACCAGTCTCCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 28 .78 RPM |
| SRP012922_cerebellum | 3 .44 RPM |
| SRP012922_heart | 3 .71 RPM |
| SRP012922_kidney | 25 .46 RPM |
| SRP012922_liver | 8 .98 RPM |
| SRP012922_lung | 35 .43 RPM |
| SRP012922_quadricep_muscle | 6 .58 RPM |
| SRP012922_spleen | 35 .83 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000012057 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000014687 | other_paralog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000014821 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000007110 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000013946 | ortholog_one2one | 2 retrogenes | |
| Tursiops truncatus | ENSTTRG00000016450 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_534 | 80.24 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_580 | 72.54 | 98.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_2168 | 67.67 | 53.06 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000011956 retrocopies