Parental gene: | RNF13, ENSDNOG00000014687 |
| Aliases: | None |
| Description: | ring finger protein 13 [Source:HGNC Symbol;Acc:10057] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_7243:92824..251507(+) |
>ENSDNOG00000014687
ATGCTGCTCTCCATAGGAATGCTCATGCTGTCGGCCACACAAGTCTACACCATCTTGACTGTCCAGTTCTTCGCATTTTT
AAACCTACTGCCTGTAGAAGCAGACATTTTAGCATATAATTTTGAAAATGCATCTCAGACATTTGATGATCTTCCTGCAA
GATTTGGTTATAGACTTCCAGCTGAAGGTTTAAAGGGTTTTCTGATTAACTCAAAACCAGAGAATGCCTGTGAACCTATA
GTGCCTCCACCACTAAAAGATAATTCATCAGGCACTTTCATCGTGTTAATTAGAAGACTTGATTGCAATTTTGATATAAA
GGTTTTAAATGCACAGAGAGCGGGATTCAAGGCAGCCATAGTTCACAATGTCGATTCTGATGAACTCATTAGCATGGGAT
CCAACGACATTGATGTTTTAAAGAAAATTGACATTCCATCTGTCTTTATTGGTGAATCATCAGCTAATTCCCTGAAAGAT
GAATTCATATATGAAAAAGGGGGCCACATTATTTTAGTTCCGGAATTTAGTCTTCCTCTGGAATACTACCTCATCCCCTT
CATCATTGTGAGCATCTGTCTCATCTTGATAGTCATTTTCATGATCACAAAATTTGTCCAGGACAGACACAGAGCTAGAA
GAAACAGACTTCGTAAAGATCAACTTAAGAAACTCCCTATACATAAGTTCAAGAAAGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTATCACTGCAAGTGTGTAGA
CCCTTGGCTAACTAAAACGAAAAAAACCTGTCCAGTCTGCAAGCAAAAAGTTGTTCCTTCTCAAGGTGATTCAGACTCTG
ACACAGATAGTAGTCAAGAAGAAAATGAAGTGTCAGAACATACCCCTTTACTTAGACCTTTGGCTTCTGTCAGCACCCAG
TCATTTGGTGCTTTGTCAGAATCGCACTCACATCAGAACATGACAGAATCTTCAGACTATGAAGAAGAGGACAATGAAGA
CACTGACAGTAGTGATGCAGAAAATGAAATTAATGAACACAGTGTCGTGGTCCAGTTGCAGCCTAATGGTGAACGGGATT
TCAACATAGCAAATACTGTTTGA
ATGCTGCTCTCCATAGGAATGCTCATGCTGTCGGCCACACAAGTCTACACCATCTTGACTGTCCAGTTCTTCGCATTTTT
AAACCTACTGCCTGTAGAAGCAGACATTTTAGCATATAATTTTGAAAATGCATCTCAGACATTTGATGATCTTCCTGCAA
GATTTGGTTATAGACTTCCAGCTGAAGGTTTAAAGGGTTTTCTGATTAACTCAAAACCAGAGAATGCCTGTGAACCTATA
GTGCCTCCACCACTAAAAGATAATTCATCAGGCACTTTCATCGTGTTAATTAGAAGACTTGATTGCAATTTTGATATAAA
GGTTTTAAATGCACAGAGAGCGGGATTCAAGGCAGCCATAGTTCACAATGTCGATTCTGATGAACTCATTAGCATGGGAT
CCAACGACATTGATGTTTTAAAGAAAATTGACATTCCATCTGTCTTTATTGGTGAATCATCAGCTAATTCCCTGAAAGAT
GAATTCATATATGAAAAAGGGGGCCACATTATTTTAGTTCCGGAATTTAGTCTTCCTCTGGAATACTACCTCATCCCCTT
CATCATTGTGAGCATCTGTCTCATCTTGATAGTCATTTTCATGATCACAAAATTTGTCCAGGACAGACACAGAGCTAGAA
GAAACAGACTTCGTAAAGATCAACTTAAGAAACTCCCTATACATAAGTTCAAGAAAGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTATCACTGCAAGTGTGTAGA
CCCTTGGCTAACTAAAACGAAAAAAACCTGTCCAGTCTGCAAGCAAAAAGTTGTTCCTTCTCAAGGTGATTCAGACTCTG
ACACAGATAGTAGTCAAGAAGAAAATGAAGTGTCAGAACATACCCCTTTACTTAGACCTTTGGCTTCTGTCAGCACCCAG
TCATTTGGTGCTTTGTCAGAATCGCACTCACATCAGAACATGACAGAATCTTCAGACTATGAAGAAGAGGACAATGAAGA
CACTGACAGTAGTGATGCAGAAAATGAAATTAATGAACACAGTGTCGTGGTCCAGTTGCAGCCTAATGGTGAACGGGATT
TCAACATAGCAAATACTGTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 26 .84 RPM |
| SRP012922_cerebellum | 30 .24 RPM |
| SRP012922_heart | 12 .99 RPM |
| SRP012922_kidney | 26 .56 RPM |
| SRP012922_liver | 45 .36 RPM |
| SRP012922_lung | 79 .72 RPM |
| SRP012922_quadricep_muscle | 9 .69 RPM |
| SRP012922_spleen | 79 .21 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000010433 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000008370 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000011956 | other_paralog | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000001221 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003149 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000014202 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_139 | 90.74 | 56.58 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000014687 retrocopies