Parental gene: | SEC61A1, ENSDNOG00000015763 |
| Aliases: | None |
| Description: | Sec61 alpha 1 subunit (S. cerevisiae) [Source:HGNC Symbol;Acc:18276] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_386:10316..109474(+) |
>ENSDNOG00000015763
ATGGCGATCAAATTTCTTGAAGTCATCAAGCCCTTCTGTGTCATCCTGCCGGAAATTCAGAAGCCAGAGAGGAAAATTCA
GTTTAAGGAGAAAGTGCTATGGACTGCTATCACCCTCTTTATCTTCTTAGTATGCTGCCAGATCCCCCTGTTTGGTATCA
TGTCTTCAGACTCAGCCGACCCTTTCTATTGGATGAGAGTGATTCTGGCCTCTAACAGAGGCACACTGATGGAGCTGGGG
ATCTCTCCCATTGTCACCTCCGGCCTGATCATGCAGCTCTTGGCTGGTGCAAAAATAATCGAGGTCGGTGACACCCCAAA
AGACCGAGCTCTCTTCAATGGAGCCCAAAAGTTATTTGGCATGATCATTACCATTGGCCAGTCTATTGTGTACGTGATGA
CCGGAATGTATGGGGACCCTTCAGAAATGGGTGCTGGAATCTGCCTGCTCATCACCATCCAGCTCTTTGTTGCTGGATTA
ATTGTCCTACTTTTGGATGAACTCCTACAAAAAGGGTACGGCCTGGGCTCTGGAATCTCCCTTTTCATCGCAACCAACAT
CTGCGAGACCATCGTGTGGAAGGCGTTCAGCCCCACCACCGTCAACACTGGCCGAGGAATGGAGTTTGAAGGAGCCATCA
TTGCACTCTTCCACCTGCTGGCCACGCGCACGGACAAAGTCCGAGCGCTTCGCGAGGCCTTCTACCGCCAGAATCTGCCC
AACCTCATGAACCTCATTGCCACCATCTTTGTCTTTGCAGTAGTCATCTACTTCCAGGGCTTCCGCGTGGACCTGCCGAT
CAAGTCCGCCCGTTACAGAGGCCAGTATAACACCTACCCCATCAAGCTCTTCTACACCTCCAACATTCCCATCATCCTGC
AGTCTGCGCTGGTGTCCAATCTGTACGTCATCTCCCAGATGTTGTCCGCGCGCTTCAGTGGGAACTTGCTGGTCAGCCTG
CTGGGCACTTGGTCTGACACCTCTTCCGGGGGCCCAGCGCGCGCTTACCCAGTGGGCGGCCTCTGCTACTACCTGTCGCC
CCCGGAGTCGTTCGGCTCCGTGCTGGAGGACCCCGTCCACGCGGTCGTGTACATAGTGTTCATGCTGGGCTCCTGCGCCT
TCTTCTCCAAAACCTGGATCGAAGTCTCAGGCTCTTCTGCCAAAGACGTTGCAAAGCAGCTGAAGGAGCAGCAGATGGTG
ATGAGGGGCCACCGAGAGACTTCCATGGTCCACGAGCTCAATCGGTACATTCCCACGGCAGCAGCCTTCGGCGGGCTGTG
CATCGGCGCCCTCTCGGTCCTGGCCGACTTCCTGAGCGCCATCGAGTCTAGCACCAGAATCCTGCTCGCCGTCACCATCA
TTTACCAGTACTTCGAAATCTTCGTGAAGGAACAGAGTGAGGTTAGCAGCATAGGAGCCCTTCTCTTCTGA
ATGGCGATCAAATTTCTTGAAGTCATCAAGCCCTTCTGTGTCATCCTGCCGGAAATTCAGAAGCCAGAGAGGAAAATTCA
GTTTAAGGAGAAAGTGCTATGGACTGCTATCACCCTCTTTATCTTCTTAGTATGCTGCCAGATCCCCCTGTTTGGTATCA
TGTCTTCAGACTCAGCCGACCCTTTCTATTGGATGAGAGTGATTCTGGCCTCTAACAGAGGCACACTGATGGAGCTGGGG
ATCTCTCCCATTGTCACCTCCGGCCTGATCATGCAGCTCTTGGCTGGTGCAAAAATAATCGAGGTCGGTGACACCCCAAA
AGACCGAGCTCTCTTCAATGGAGCCCAAAAGTTATTTGGCATGATCATTACCATTGGCCAGTCTATTGTGTACGTGATGA
CCGGAATGTATGGGGACCCTTCAGAAATGGGTGCTGGAATCTGCCTGCTCATCACCATCCAGCTCTTTGTTGCTGGATTA
ATTGTCCTACTTTTGGATGAACTCCTACAAAAAGGGTACGGCCTGGGCTCTGGAATCTCCCTTTTCATCGCAACCAACAT
CTGCGAGACCATCGTGTGGAAGGCGTTCAGCCCCACCACCGTCAACACTGGCCGAGGAATGGAGTTTGAAGGAGCCATCA
TTGCACTCTTCCACCTGCTGGCCACGCGCACGGACAAAGTCCGAGCGCTTCGCGAGGCCTTCTACCGCCAGAATCTGCCC
AACCTCATGAACCTCATTGCCACCATCTTTGTCTTTGCAGTAGTCATCTACTTCCAGGGCTTCCGCGTGGACCTGCCGAT
CAAGTCCGCCCGTTACAGAGGCCAGTATAACACCTACCCCATCAAGCTCTTCTACACCTCCAACATTCCCATCATCCTGC
AGTCTGCGCTGGTGTCCAATCTGTACGTCATCTCCCAGATGTTGTCCGCGCGCTTCAGTGGGAACTTGCTGGTCAGCCTG
CTGGGCACTTGGTCTGACACCTCTTCCGGGGGCCCAGCGCGCGCTTACCCAGTGGGCGGCCTCTGCTACTACCTGTCGCC
CCCGGAGTCGTTCGGCTCCGTGCTGGAGGACCCCGTCCACGCGGTCGTGTACATAGTGTTCATGCTGGGCTCCTGCGCCT
TCTTCTCCAAAACCTGGATCGAAGTCTCAGGCTCTTCTGCCAAAGACGTTGCAAAGCAGCTGAAGGAGCAGCAGATGGTG
ATGAGGGGCCACCGAGAGACTTCCATGGTCCACGAGCTCAATCGGTACATTCCCACGGCAGCAGCCTTCGGCGGGCTGTG
CATCGGCGCCCTCTCGGTCCTGGCCGACTTCCTGAGCGCCATCGAGTCTAGCACCAGAATCCTGCTCGCCGTCACCATCA
TTTACCAGTACTTCGAAATCTTCGTGAAGGAACAGAGTGAGGTTAGCAGCATAGGAGCCCTTCTCTTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 121 .93 RPM |
| SRP012922_cerebellum | 24 .74 RPM |
| SRP012922_heart | 6 .73 RPM |
| SRP012922_kidney | 41 .07 RPM |
| SRP012922_liver | 93 .97 RPM |
| SRP012922_lung | 65 .21 RPM |
| SRP012922_quadricep_muscle | 6 .75 RPM |
| SRP012922_spleen | 93 .29 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Sarcophilus harrisii | ENSSHAG00000013915 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_2642 | 78.26 | 52.94 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000015763 retrocopies