Parental gene: | GABPA, ENSDNOG00000016059 |
| Aliases: | None |
| Description: | GA binding protein transcription factor, alpha subunit 60kDa [Source:HGNC Symbol;Acc:4071] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_4494:186907..221650(+) |
>ENSDNOG00000016059
ATGACTAAAAGAGAAGCAGAGGAGCTGATAGAAATTGAGATTGATGGAACAGAGAAAACAGAATGCACAGAAGAAAGCAT
TGTAGAACAAACCTACACCCCAGCTGAATGTGTAAGCCAAGCCATAGACATCAATGAGGCAATAGGTAATTTAAAGAAAC
TGCTAGAACCCAGACTACAGTCACTGGATGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNCTGGATCCTGAAAGGAGTTTG
TTTGACCAAGGAGTAAAGACAGATGGAACTGTACAACTTAGTGTACAGGTAATTTCTTACCAAGGAATTGAGCCGAAGTT
AAACATCCTTGAAATTGTTAAACCTGCGGAAACTGTTGAAGTAGTTATTGATCCAGATGCTCACCATGCTGAGGCTGAAG
CACATCTAGTAGAGGAAGCTCAAGTGATAACCCTTGATGGCACAAAACACATCACAACCATTTCTGATGAAACCTCAGAA
CAAGTGACAAGATGGGCTGCTGCACTGGAAGGTTATAGGAAAGAGCAAGAGCGCCTTGGGATACCCTATGATCCTATACA
GTGGTCCACAGACCAAGTCCTGCATTGGGTGGTTTGGGTAATGAAGGAATTCAGCATGACTGATATAGACCTTACCTCAC
TCAACATTTCGGGAAGAGAATTATGTAGTCTCAACCAAGAAGATTTTTTTCAGCGGGTCCCCCGGGGAGAAATTCTCTGG
AGTCATCTGGAACTTCTTCGAAAATATGTATTGGCAAGCCAAGAACAACAGATGAATGAGATAGTTACCATTGATCAACC
TGTGCAAATTATTCCAGCATCAGTGCAGTCTGCTACACCAACTACCATTAAAGTTTTAAATAGTAGTGCAAAGGCAGCGA
AAGTACAAAGAGCTCCAAGGATTTCAGGAGAAGATAGAAGTTCACCTGGGAACAGAACAGGAAACAATGGCCAAATCCAA
CTGTGGCAATTTTTGCTAGAACTCCTAACTGACAAGGATGCTCGAGACTGCATTTCTTGGGTTGGTGATGAAGGCGAGTT
TAAGCTAAATCAGCCTGAACTGGTTGCACAGAAATGGGGACAACGTAAAAATAAACCTACAATGAACTATGAGAAACTCA
GTCGTGCATTAAGGTATTATTATGATGGGGACATGATTTGTAAAGTTCAAGGCAAAAGATTTGTATACAAGTTTGTCTGT
GACTTGAAGACTCTTGGATACAGTACAGCAGTTGCCCTGGCTACTGCTTCTCTGCAACAGAGAAGGGATAATTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 8 .95 RPM |
| SRP012922_cerebellum | 4 .40 RPM |
| SRP012922_heart | 3 .25 RPM |
| SRP012922_kidney | 3 .01 RPM |
| SRP012922_liver | 4 .33 RPM |
| SRP012922_lung | 7 .64 RPM |
| SRP012922_quadricep_muscle | 4 .50 RPM |
| SRP012922_spleen | 12 .36 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000013817 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000154727 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000009283 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000013810 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000004785 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_476 | 76.89 | 55.66 | Please wait, loading  |
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Download FASTA sequences of all ENSDNOG00000016059 retrocopies