Parental gene: | ABCB10, ENSDNOG00000023785 |
| Aliases: | None |
| Description: | ATP-binding cassette, sub-family B (MDR/TAP), member 10 [Source:HGNC Symbol;Acc:41] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_3200:5148..28186(-) |
>ENSDNOG00000023785
TTAGCTGAGGAGAGTATTGGAAACATACGAACCGTTCGCGCTTTTGGAAAAGAGATGATTGAAATAGAGAAGTACACCAG
CAAAGTGGGTTACGTCATGCACCTAGCGAGGAAGGAGGCGCTGGCCCAGGCAGGCTTCTTCGGAGCGACGGGGCTCTCCG
GGAACCTGATCGTGCTGTCGGTCCTCTACAAAGGCGGGCTGCTGATGGGCAGTGCTCACATGACCGTGGGTGAACTCTCC
TCCTTCCTCATGTACTCCTTCTGGGTCGGCTTAAGCATCGGAGGTCTGAGCTCTTTCTATTCCGAGCTGATGAAAGGCCT
GGGTGCTGGAGGACGCCTCTGGGAGCTCATGGAGAGGAAGCCTGTGCTTCCGTTTAACGAGGGGGCCATGCCGCGGGAGG
AGGCCTTCCAGGGCACCCTGGAGTTCAGGCACGTGCGCTTCGCCTACCCCGCCCGCCCGGAGGCGCCGGTGCTCCAGGAC
CTGAGCCTCCGCATCCCCGCGGGCTCCGTCACGGCGCTCGTGGGCCCCAGCGGCTCGGGCAAGTCCACCGTGGTCTCGCT
GCTCCTCCGGCTGTACGACCCCGTGTCCGGAACTGTCAGTTTGGATGGTTGTGACATCCGTCAGCTAAATCCAGTCTGGC
TGCGATCCAAGATCGGGACCGTGAGTCAGGAACCAATTTTGTTTTCCTGCTCAATTGCTGAGAACATCGCTTATGGCGCG
GACGACCCTGCCCTGGTGACGGCCGAGCAGGTGGAGAAAGTGGCCGACGTGGCGAACGCAGCTGCTTTCATCAGAAACTT
CCCCCAGGGATTCAGCACCGTGGTTGGAGAAAAGGGTGTTCTCCTTTCAGGTGGACAGAAACAGCGGATTGCAATTGCCC
GTGCACTCCTGAAGAATCCCAAAATTCTTCTCCTAGATGAAGCGACCAGTGCGCTGGACGCAGAGAATGAGCACCTGGTG
CAGGAGGCCCTGGACCGCCTCATGGAGGGAAGGACGGTGCTGGTCATCGCCCACCGCCTGTCCACCGTCAAGAGGGCCCA
CAGGGTTGCCGTGCTCAGCCAGGGCAGGATCGCCGAGTACGGCAGGCACGAGGAGCTGCTGGCCAAGCCGGACGGGCTGT
ACAGGAGGCTGATGGACAAGCAGAGTTTTGCGTCAGCGTAG
TTAGCTGAGGAGAGTATTGGAAACATACGAACCGTTCGCGCTTTTGGAAAAGAGATGATTGAAATAGAGAAGTACACCAG
CAAAGTGGGTTACGTCATGCACCTAGCGAGGAAGGAGGCGCTGGCCCAGGCAGGCTTCTTCGGAGCGACGGGGCTCTCCG
GGAACCTGATCGTGCTGTCGGTCCTCTACAAAGGCGGGCTGCTGATGGGCAGTGCTCACATGACCGTGGGTGAACTCTCC
TCCTTCCTCATGTACTCCTTCTGGGTCGGCTTAAGCATCGGAGGTCTGAGCTCTTTCTATTCCGAGCTGATGAAAGGCCT
GGGTGCTGGAGGACGCCTCTGGGAGCTCATGGAGAGGAAGCCTGTGCTTCCGTTTAACGAGGGGGCCATGCCGCGGGAGG
AGGCCTTCCAGGGCACCCTGGAGTTCAGGCACGTGCGCTTCGCCTACCCCGCCCGCCCGGAGGCGCCGGTGCTCCAGGAC
CTGAGCCTCCGCATCCCCGCGGGCTCCGTCACGGCGCTCGTGGGCCCCAGCGGCTCGGGCAAGTCCACCGTGGTCTCGCT
GCTCCTCCGGCTGTACGACCCCGTGTCCGGAACTGTCAGTTTGGATGGTTGTGACATCCGTCAGCTAAATCCAGTCTGGC
TGCGATCCAAGATCGGGACCGTGAGTCAGGAACCAATTTTGTTTTCCTGCTCAATTGCTGAGAACATCGCTTATGGCGCG
GACGACCCTGCCCTGGTGACGGCCGAGCAGGTGGAGAAAGTGGCCGACGTGGCGAACGCAGCTGCTTTCATCAGAAACTT
CCCCCAGGGATTCAGCACCGTGGTTGGAGAAAAGGGTGTTCTCCTTTCAGGTGGACAGAAACAGCGGATTGCAATTGCCC
GTGCACTCCTGAAGAATCCCAAAATTCTTCTCCTAGATGAAGCGACCAGTGCGCTGGACGCAGAGAATGAGCACCTGGTG
CAGGAGGCCCTGGACCGCCTCATGGAGGGAAGGACGGTGCTGGTCATCGCCCACCGCCTGTCCACCGTCAAGAGGGCCCA
CAGGGTTGCCGTGCTCAGCCAGGGCAGGATCGCCGAGTACGGCAGGCACGAGGAGCTGCTGGCCAAGCCGGACGGGCTGT
ACAGGAGGCTGATGGACAAGCAGAGTTTTGCGTCAGCGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 16 .92 RPM |
| SRP012922_cerebellum | 31 .34 RPM |
| SRP012922_heart | 14 .62 RPM |
| SRP012922_kidney | 22 .18 RPM |
| SRP012922_liver | 22 .60 RPM |
| SRP012922_lung | 42 .15 RPM |
| SRP012922_quadricep_muscle | 46 .73 RPM |
| SRP012922_spleen | 244 .26 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000011011 | ortholog_one2many | 1 retrogene | |
| Homo sapiens | ENSG00000135776 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_2360 | 71.00 | 51.55 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000023785 retrocopies