Parental gene:

TMEM254, ENSDNOG00000024625

Aliases:None
Description:transmembrane protein 254 [Source:HGNC Symbol;Acc:25804]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_3030:118..8212(+)


>ENSDNOG00000024625
TCAGCGCCACCCAGCGCCTCAGTAGCGAGCTCTTTCAGGATGGTGGCGGCGAAGTCGGGGGCTGGCCGGGCTACTGCCGC
CTACTTCCGCATCGCCAGACCCTTGCCCTTGCTGGTCACGGTCCTGGGACTGGGCTGCTATACGTGGGTTGTCTTCTGGC
CTCAGAGTATCCCCTATCAGAGGCTTGGGCCTCTGGGACCCTTCACTCAGTACTTGGTGGACAACCATCCCACCCTGCTA
CGCAATGGGTTTTGGCTTGCCTGGCTGATTCATGTGGGAGAGTCCTTGTATGCCATGGTATTGTGC

Library Parental gene expression (RPM)
SRP012922_ascending_colon 1 .17 RPM
SRP012922_cerebellum 0 .96 RPM
SRP012922_heart 0 .46 RPM
SRP012922_kidney 1 .64 RPM
SRP012922_liver 2 .94 RPM
SRP012922_lung 1 .68 RPM
SRP012922_quadricep_muscle 0 .17 RPM
SRP012922_spleen 0 .23 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000015748 ortholog_one2one 3 retrogenes
retro_cfam_602, retro_cfam_635, retro_cfam_637,
Callithrix jacchus ENSCJAG00000007670 ortholog_one2one 1 retrogene
retro_cjac_3839,
Felis catus ENSFCAG00000026147 ortholog_one2one 1 retrogene
retro_fcat_401,
Myotis lucifugus ENSMLUG00000007585 ortholog_one2one 16 retrogenes
retro_mluc_1178, retro_mluc_2482, retro_mluc_2491, retro_mluc_2492, retro_mluc_2528, retro_mluc_2532, retro_mluc_2550, retro_mluc_2551, retro_mluc_2552, retro_mluc_2572, retro_mluc_2573, retro_mluc_2583, retro_mluc_2586, retro_mluc_2603, retro_mluc_2623, retro_mluc_766,
Macaca mulatta ENSMMUG00000003015 ortholog_one2one 1 retrogene
retro_mmul_1583,
Mus musculus ENSMUSG00000072676 ortholog_one2many 1 retrogene
retro_mmus_2102,
Oryctolagus cuniculus ENSOCUG00000013679 possible_ortholog 1 retrogene
retro_ocun_453,
Otolemur garnettii ENSOGAG00000028898 ortholog_one2one 1 retrogene
retro_ogar_59,
Tarsius syrichta ENSTSYG00000006920 ortholog_one2one 1 retrogene
retro_tsyr_103,
Tursiops truncatus ENSTTRG00000006122 ortholog_one2one 1 retrogene
retro_ttru_454,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_555 59.09 84.31
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Download FASTA sequences of all ENSDNOG00000024625 retrocopies