Parental gene: | LANCL1, ENSECAG00000009197 |
| Aliases: | None |
| Description: | LanC lantibiotic synthetase component C-like 1 (bacterial) [Source:HGNC Symbol;Acc:6508] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 6:1104388..1145202(-) |
>ENSECAG00000009197
ATGGCGGAGAGGGCCTTGCCGAACCCCTACGCCGACTACAACAGGTCGCTGGCCGAGGGCTACTGCGACGCCGCGGGCGC
GCTGACTGCTGAGTTCTCACAGCGCTTGAACAATGAGATTCGAGAGCTGCTTCAGCGAATGGAGAGAGGCCTGAAGTCGG
CGGATCCTCGGGATGGCACTGCCTACACTGGCTGGACGGGCATTGCTGTGCTTTACCTACATCTCTATGATGTGTTCGGG
GACCCTGGCTACCTACAGATGGCACACACTTATGTAAAGCAGGGTCTGAACTGTTTGTCCAAGCGTTCCATCACTTTCCT
TTGTGGGGATGCAGGCCCTCTGGCAGTGGCTGCTGTGGTGTATCACAAGATGAACAATGAGAAGCAGGCAGAAGACTGCA
TCACCCGGCTAATTCACCTAAATAAGCTTGATTCCCATGCTCCAAATGAAATGCTCTATGGACGGATGGGCTACATCTAT
GCTCTTCTCTTTGTGAATAAGCACTTTGGAGTGGAAAAGATTCCTCAAAGCCACATTCAGCAGATTTGTGAAACAGTCTT
AACCTCTGGAGAAAACCTAGCTAGAAAGAGAAATTTCACAGCAAAGACTCCACTGATGTATGAATGGTACCAAGAATATT
ACGTGGGGGCTGCTCACGGCCTGGCAGGAATTTACTACTTTCTGATGCAGCCCAGCCTTCAGGTGAGCCATGCGAAGTTA
CATAGTTTGGTCAAGCCCAGTGTAGACTATGTCTGCCAGCTGAAATTCCCTTCTGGCAATTACCCGCCATGTGTGGACGA
CACTCGAGATCTGCTAGTCCACTGGTGCCACGGTGCCCCTGGGGTAATCTACATGCTCATCCAGGCCTGGAAGGTGTTCA
GAGAGGAGCGCTATCTCACCGACGCCCGGCAGAGCGCTGACCTGATCTGGCAGTACGGGCTGCTGAAGAAGGGCTACGGG
CTGTGCCACGGCGCCGCGGGCAATGCCTATGCCTTCCTGGCGCTGTTCAACCTCACACAGGACAGGAAGTACCTGTACAG
GGCCTGCAAGTTCGCTGAGTGGTGCTTGGATTACGGAGAACATGGATGCAGAACACCAGACACCCCCTTCTCCCTCTTTG
AAGGAATGGCTGGAACGATATATTTCCTGGCTGACCTGCTAGTGCCCGAGAAAGCCCGGTTCCCTGCATTTGAACTGTAA
ATGGCGGAGAGGGCCTTGCCGAACCCCTACGCCGACTACAACAGGTCGCTGGCCGAGGGCTACTGCGACGCCGCGGGCGC
GCTGACTGCTGAGTTCTCACAGCGCTTGAACAATGAGATTCGAGAGCTGCTTCAGCGAATGGAGAGAGGCCTGAAGTCGG
CGGATCCTCGGGATGGCACTGCCTACACTGGCTGGACGGGCATTGCTGTGCTTTACCTACATCTCTATGATGTGTTCGGG
GACCCTGGCTACCTACAGATGGCACACACTTATGTAAAGCAGGGTCTGAACTGTTTGTCCAAGCGTTCCATCACTTTCCT
TTGTGGGGATGCAGGCCCTCTGGCAGTGGCTGCTGTGGTGTATCACAAGATGAACAATGAGAAGCAGGCAGAAGACTGCA
TCACCCGGCTAATTCACCTAAATAAGCTTGATTCCCATGCTCCAAATGAAATGCTCTATGGACGGATGGGCTACATCTAT
GCTCTTCTCTTTGTGAATAAGCACTTTGGAGTGGAAAAGATTCCTCAAAGCCACATTCAGCAGATTTGTGAAACAGTCTT
AACCTCTGGAGAAAACCTAGCTAGAAAGAGAAATTTCACAGCAAAGACTCCACTGATGTATGAATGGTACCAAGAATATT
ACGTGGGGGCTGCTCACGGCCTGGCAGGAATTTACTACTTTCTGATGCAGCCCAGCCTTCAGGTGAGCCATGCGAAGTTA
CATAGTTTGGTCAAGCCCAGTGTAGACTATGTCTGCCAGCTGAAATTCCCTTCTGGCAATTACCCGCCATGTGTGGACGA
CACTCGAGATCTGCTAGTCCACTGGTGCCACGGTGCCCCTGGGGTAATCTACATGCTCATCCAGGCCTGGAAGGTGTTCA
GAGAGGAGCGCTATCTCACCGACGCCCGGCAGAGCGCTGACCTGATCTGGCAGTACGGGCTGCTGAAGAAGGGCTACGGG
CTGTGCCACGGCGCCGCGGGCAATGCCTATGCCTTCCTGGCGCTGTTCAACCTCACACAGGACAGGAAGTACCTGTACAG
GGCCTGCAAGTTCGCTGAGTGGTGCTTGGATTACGGAGAACATGGATGCAGAACACCAGACACCCCCTTCTCCCTCTTTG
AAGGAATGGCTGGAACGATATATTTCCTGGCTGACCTGCTAGTGCCCGAGAAAGCCCGGTTCCCTGCATTTGAACTGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 24 .02 RPM |
| SRP021940_embryo | 45 .67 RPM |
| SRP021940_cerebellum | 172 .78 RPM |
| SRP021940_testis | 299 .77 RPM |
| SRP021940_placental_villous | 18 .47 RPM |
| SRP021940_articular_cartilage | 19 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000005620 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_944 | 90.65 | 61.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000009197 retrocopies