Parental gene: | ENSECAG00000011807 |
| Aliases: | None |
| Description: | None |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 16:4683888..4709699(+) |
>ENSECAG00000011807
ATGGAGCACATACAGGGGGCCTGGAAGACGATCAGCAATGGTTTTGGATTCAAAGACGCGGTGTTTGATGGCCCCAGCTG
TATCTCCCCTACAATAGTTCAGCAGTTTGGCTATCAGCGTCGGGCGTCAGATGATGGCAAACTTACGGACTCTTCTAAGA
CAAGCAACACTATCCGTGTTTTCTTGCCAAATAAGCAAAGAACCGTGGTCAATGTGCGAAATGGAATGAGCTTGCATGAC
TGCCTTATGAAAGCACTCAAGGTGAGGGGCCTGCAACCGGAGTGCTGTGCAGTGTTCAGACTTCTCCACGAACACAAAGG
TAAAAAAGCACGTTTAGATTGGAATACTGATGCTGCCTCATTGATTGGAGAAGAGCTTCAAGTAGATTTCCTGGATCATG
TTCCTCTCACAACACACAACTTTGCTCGGAAGACCTTTCTGAAGCTTGCCTTTTGTGACATCTGTCAGAAGTTCTTGCTA
AATGGATTTCGATGTCAGACTTGTGGCTACAAATTTCATGAGCACTGTAGCACCAAAGTACCTACTATGTGCGTGGACTG
GAGTAATATCAGACAACTCTTATTGTTTCCGAATTCCACTATTGGTGATAGTGGAGTCCCAGCACTGCCTTCCTTGACAA
TGCGTCGGATGCGAGAGTCTGTTTCCCGGATGCCTGTTAGTTCCCAGCACAGATACTCCACGCCCCACGCCTTCACATTC
AACACCTCCAGTCCCTCCTCTGAAGGTTCCCTCTCCCAGAGGCAGAGATCGACGTCCACACCTAATGTCCACATGGTCAG
CACCACCCTGCCTGTGGACAGCAGGATGATTGAGGATGCAATTCGAAGCCACACCTTGTCCAGCAGCCCCAACAATCTGA
GCCCAACGGGCTGGTCACAGCCTAAAACCCCTGTGCCGGCACAGAGAGAGCGGGCACCAGGATCCGGGACCCAGGAGAAA
AACAAAATTAGACCTCGAGGTCAGAGAGATTCAAGCTATTACTGGGAAATAGAAGCGAGTGAAGTGATGCTCTCCACCCG
GATTGGGTCAGGCTCCTTTGGAACTGTGTATAAGGGCAAATGGCACGGAGACGTTGCAGTGAAAATCTTAAAGGTTGTTG
ACCCCACACCAGAGCAGTTCCAGGCGTTCAGGAACGAGGTGGCTGTCCTGCGTAAAACACGGCACGTGAACATCCTGCTC
TTCATGGGGTACATGACGAAGGACAACCTGGCAATTGTGACTCAGTGGTGTGAGGGCAGCAGCCTCTACAAACACCTGCA
TGTCCAGGAGACCAAGTTCCAGATGTTCCAGTTGATTGACATCGCCCGGCAGACGGCTCAGGGAATGGACTATTTGCATG
CAAAAAACATCATCCACAGAGATATGAAATCCAACAATATATTTCTCCATGAAGGCCTGACGGTGAAAATTGGAGACTTT
GGTTTGGCAACAGTCAAGTCGCGCTGGAGTGGTTCTCAGCAGGTTGAACAACCCACTGGCTCTGTCCTGTGGATGGCCCC
AGAGGTGATCCGAATGCAGGATAATAACCCGTTCAGCTTCCAGTCTGATGTCTACTCCTATGGCATTGTACTCTATGAGC
TCATGACAGGGGAACTGCCTTACTCCCACATCAACAACCGAGATCAGATCATCTTCATGGTGGGCCGAGGGTATGCCTCC
CCAGACCTTAGTAAGCTATACAAGAACTGCCCCAAAGCAATGAAGAGGCTTGTGGCTGACTGCGTGAAGAAAGTTAAGGA
GGAGAGGCCTCTTTTTCCCCAGATCTTGTCTTCCATCGAGTTGCTCCAACACTCTCTACCGAAAATCAACCGGAGTGCTT
CTGAGCCATCCCTGCATCGGGCGGCCCACACCGAGGACATCAATGCCTGCACGTTGACCACGTCCCCTAGACTGCCTGTC
TTCTAG
ATGGAGCACATACAGGGGGCCTGGAAGACGATCAGCAATGGTTTTGGATTCAAAGACGCGGTGTTTGATGGCCCCAGCTG
TATCTCCCCTACAATAGTTCAGCAGTTTGGCTATCAGCGTCGGGCGTCAGATGATGGCAAACTTACGGACTCTTCTAAGA
CAAGCAACACTATCCGTGTTTTCTTGCCAAATAAGCAAAGAACCGTGGTCAATGTGCGAAATGGAATGAGCTTGCATGAC
TGCCTTATGAAAGCACTCAAGGTGAGGGGCCTGCAACCGGAGTGCTGTGCAGTGTTCAGACTTCTCCACGAACACAAAGG
TAAAAAAGCACGTTTAGATTGGAATACTGATGCTGCCTCATTGATTGGAGAAGAGCTTCAAGTAGATTTCCTGGATCATG
TTCCTCTCACAACACACAACTTTGCTCGGAAGACCTTTCTGAAGCTTGCCTTTTGTGACATCTGTCAGAAGTTCTTGCTA
AATGGATTTCGATGTCAGACTTGTGGCTACAAATTTCATGAGCACTGTAGCACCAAAGTACCTACTATGTGCGTGGACTG
GAGTAATATCAGACAACTCTTATTGTTTCCGAATTCCACTATTGGTGATAGTGGAGTCCCAGCACTGCCTTCCTTGACAA
TGCGTCGGATGCGAGAGTCTGTTTCCCGGATGCCTGTTAGTTCCCAGCACAGATACTCCACGCCCCACGCCTTCACATTC
AACACCTCCAGTCCCTCCTCTGAAGGTTCCCTCTCCCAGAGGCAGAGATCGACGTCCACACCTAATGTCCACATGGTCAG
CACCACCCTGCCTGTGGACAGCAGGATGATTGAGGATGCAATTCGAAGCCACACCTTGTCCAGCAGCCCCAACAATCTGA
GCCCAACGGGCTGGTCACAGCCTAAAACCCCTGTGCCGGCACAGAGAGAGCGGGCACCAGGATCCGGGACCCAGGAGAAA
AACAAAATTAGACCTCGAGGTCAGAGAGATTCAAGCTATTACTGGGAAATAGAAGCGAGTGAAGTGATGCTCTCCACCCG
GATTGGGTCAGGCTCCTTTGGAACTGTGTATAAGGGCAAATGGCACGGAGACGTTGCAGTGAAAATCTTAAAGGTTGTTG
ACCCCACACCAGAGCAGTTCCAGGCGTTCAGGAACGAGGTGGCTGTCCTGCGTAAAACACGGCACGTGAACATCCTGCTC
TTCATGGGGTACATGACGAAGGACAACCTGGCAATTGTGACTCAGTGGTGTGAGGGCAGCAGCCTCTACAAACACCTGCA
TGTCCAGGAGACCAAGTTCCAGATGTTCCAGTTGATTGACATCGCCCGGCAGACGGCTCAGGGAATGGACTATTTGCATG
CAAAAAACATCATCCACAGAGATATGAAATCCAACAATATATTTCTCCATGAAGGCCTGACGGTGAAAATTGGAGACTTT
GGTTTGGCAACAGTCAAGTCGCGCTGGAGTGGTTCTCAGCAGGTTGAACAACCCACTGGCTCTGTCCTGTGGATGGCCCC
AGAGGTGATCCGAATGCAGGATAATAACCCGTTCAGCTTCCAGTCTGATGTCTACTCCTATGGCATTGTACTCTATGAGC
TCATGACAGGGGAACTGCCTTACTCCCACATCAACAACCGAGATCAGATCATCTTCATGGTGGGCCGAGGGTATGCCTCC
CCAGACCTTAGTAAGCTATACAAGAACTGCCCCAAAGCAATGAAGAGGCTTGTGGCTGACTGCGTGAAGAAAGTTAAGGA
GGAGAGGCCTCTTTTTCCCCAGATCTTGTCTTCCATCGAGTTGCTCCAACACTCTCTACCGAAAATCAACCGGAGTGCTT
CTGAGCCATCCCTGCATCGGGCGGCCCACACCGAGGACATCAATGCCTGCACGTTGACCACGTCCCCTAGACTGCCTGTC
TTCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 31 .13 RPM |
| SRP021940_embryo | 46 .62 RPM |
| SRP021940_cerebellum | 21 .50 RPM |
| SRP021940_testis | 22 .64 RPM |
| SRP021940_placental_villous | 26 .03 RPM |
| SRP021940_articular_cartilage | 25 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macaca mulatta | ENSMMUG00000007450 | ortholog_many2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000007438 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_47 | 96.07 | 55.54 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000011807 retrocopies