Parental gene: | EHD3, ENSECAG00000015195 |
| Aliases: | None |
| Description: | EH-domain containing 3 [Source:HGNC Symbol;Acc:3244] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 15:65520020..65679261(-) |
>ENSECAG00000015195
ATGTTCAGCTGGCTGGGTTCCGACGACCGCCGGAGGAAGGACCCCGAGGTCTTCCAGACAGTGAGCGAGGGGCTCAAGAA
ACTCTATAAGAGCAAGCTGCTACCCCTGGAAGAGCATTACCGCTTCCACGAGTTTCACTCGCCTGCCCTGGAGGATGCCG
ATTTCGACAACAAGCCCATGGTCCTGCTGGTGGGCCAATACTCCACTGGGAAGACCACCTTCATCAGGTACCTGCTGGAA
CAGGATTTCCCGGGTATGAGGATTGGGCCCGAGCCAACCACTGACTCCTTCATTGCGGTGATGCACGGAGAGGTGGAGGG
GATCATCCCCGGGAACGCCCTGGTGGTGGATCCTAAGAAGCCATTCAGGAAACTGAATGCCTTTGGCAATGCCTTCTTGA
ACAGGTTCATGTGTGCCCAGCTGCCCAACCCCGTGCTGGAGAGCATCAGTGTCATCGACACTCCAGGGATCCTCTCTGGG
GAGAAGCAAAGGATCAGCCGAGGGTATGACTTTGCAGCTGTCCTCGAGTGGTTCGCTGAGCGGGTCGACCGCATCATCCT
GCTGTTTGATGCCCACAAGCTGGACATCTCTGATGAATTCTCGGAAGTCATCAAGGCCCTCAAGAACCACGAGGACAAGA
TGCGGGTGGTGCTGAACAAGGCCGACCAGATTGAGACGCAGCAGCTGATGCGGGTGTACGGGGCCCTCATGTGGTCCCTG
GGGAAGATTGTGAACACCCCAGAGGTGATTCGGGTCTACATTGGCTTCTGGTCCCACCCCCTTCTCATCCCCGACAATCG
GAAACTCTTTGAGGCCGAGGAGCAGGACCTTTTCAGAGACATCCAGAGTCTGCCCCGAAACGCTGCCCTGCGCAAACTCA
ACGACCTCATCAAGAGAGCCAGGCTGGCCAAGGTCCATGCCTACATCATCAGCTCTCTAAAGAAGGAGATGCCCTCCGTG
TTTGGAAAGGAAAACAAGAAGAAGGAGCTGGTGAACAACCTGGCTGAGATTTATGGCCGGATCGAGCGGGAACACCAGAT
CTCACCTGGGGACTTTCCCAATGTGAAGAAGATGCAGGACCAGCTGCAGGCCCAGGACTTTAGCAAATTCCAGCCACTGA
AGAGCAAGCTGCTGGAGGCAGTAGACGACATGTTGGCCCACGACATTGCCCAGCTCATGGTGCTGGTGCGCCAGGAGGAG
ACACAGCGGCCCGTCCAGATGGTGAAGGGTGGAGCGTTCGAGGGCACTCTTCATGGTCCCTTTGGGCACGGCTATGGGGA
GGGGGCCGGGGAGGGCATCGATGATGCTGAGTGGGTGGTGGCCAGGGACAAGCCCATGTATGACGAGATCTTCTACACCT
TGTCACCGGTGGACGGCAAGATCACAGGTGCTAATGCCAAGAAGGAGATGGTCCGCTCCAAGCTGCCCAACAGCGTGCTG
GGCAAGATCTGGAAGCTGGCTGACATCGACAAGGATGGCATGTTGGATGATGAGGAGTTCGCACTGGCCAACCACCTCAT
TAAGGTCAAGCTGGAGGGGCATGAGCTGCCCAATGAGCTGCCTGCGCACCTCCTGCCCCCATCCAAGAGGAAAGTCACTG
AGTGA
ATGTTCAGCTGGCTGGGTTCCGACGACCGCCGGAGGAAGGACCCCGAGGTCTTCCAGACAGTGAGCGAGGGGCTCAAGAA
ACTCTATAAGAGCAAGCTGCTACCCCTGGAAGAGCATTACCGCTTCCACGAGTTTCACTCGCCTGCCCTGGAGGATGCCG
ATTTCGACAACAAGCCCATGGTCCTGCTGGTGGGCCAATACTCCACTGGGAAGACCACCTTCATCAGGTACCTGCTGGAA
CAGGATTTCCCGGGTATGAGGATTGGGCCCGAGCCAACCACTGACTCCTTCATTGCGGTGATGCACGGAGAGGTGGAGGG
GATCATCCCCGGGAACGCCCTGGTGGTGGATCCTAAGAAGCCATTCAGGAAACTGAATGCCTTTGGCAATGCCTTCTTGA
ACAGGTTCATGTGTGCCCAGCTGCCCAACCCCGTGCTGGAGAGCATCAGTGTCATCGACACTCCAGGGATCCTCTCTGGG
GAGAAGCAAAGGATCAGCCGAGGGTATGACTTTGCAGCTGTCCTCGAGTGGTTCGCTGAGCGGGTCGACCGCATCATCCT
GCTGTTTGATGCCCACAAGCTGGACATCTCTGATGAATTCTCGGAAGTCATCAAGGCCCTCAAGAACCACGAGGACAAGA
TGCGGGTGGTGCTGAACAAGGCCGACCAGATTGAGACGCAGCAGCTGATGCGGGTGTACGGGGCCCTCATGTGGTCCCTG
GGGAAGATTGTGAACACCCCAGAGGTGATTCGGGTCTACATTGGCTTCTGGTCCCACCCCCTTCTCATCCCCGACAATCG
GAAACTCTTTGAGGCCGAGGAGCAGGACCTTTTCAGAGACATCCAGAGTCTGCCCCGAAACGCTGCCCTGCGCAAACTCA
ACGACCTCATCAAGAGAGCCAGGCTGGCCAAGGTCCATGCCTACATCATCAGCTCTCTAAAGAAGGAGATGCCCTCCGTG
TTTGGAAAGGAAAACAAGAAGAAGGAGCTGGTGAACAACCTGGCTGAGATTTATGGCCGGATCGAGCGGGAACACCAGAT
CTCACCTGGGGACTTTCCCAATGTGAAGAAGATGCAGGACCAGCTGCAGGCCCAGGACTTTAGCAAATTCCAGCCACTGA
AGAGCAAGCTGCTGGAGGCAGTAGACGACATGTTGGCCCACGACATTGCCCAGCTCATGGTGCTGGTGCGCCAGGAGGAG
ACACAGCGGCCCGTCCAGATGGTGAAGGGTGGAGCGTTCGAGGGCACTCTTCATGGTCCCTTTGGGCACGGCTATGGGGA
GGGGGCCGGGGAGGGCATCGATGATGCTGAGTGGGTGGTGGCCAGGGACAAGCCCATGTATGACGAGATCTTCTACACCT
TGTCACCGGTGGACGGCAAGATCACAGGTGCTAATGCCAAGAAGGAGATGGTCCGCTCCAAGCTGCCCAACAGCGTGCTG
GGCAAGATCTGGAAGCTGGCTGACATCGACAAGGATGGCATGTTGGATGATGAGGAGTTCGCACTGGCCAACCACCTCAT
TAAGGTCAAGCTGGAGGGGCATGAGCTGCCCAATGAGCTGCCTGCGCACCTCCTGCCCCCATCCAAGAGGAAAGTCACTG
AGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 12 .16 RPM |
| SRP021940_embryo | 23 .55 RPM |
| SRP021940_cerebellum | 130 .92 RPM |
| SRP021940_testis | 16 .63 RPM |
| SRP021940_placental_villous | 18 .28 RPM |
| SRP021940_articular_cartilage | 53 .84 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000015505 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000013011 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000010371 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_581 | 55.71 | 52.81 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000015195 retrocopies