Parental gene: | ENSECAG00000017166 |
| Aliases: | None |
| Description: | None |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 20:36418424..36428554(+) |
>ENSECAG00000017166
ATGAACGTTCACTGTGGCAGTGAGAGTGACAGGTTCCTGCGGCCAGAGGCCAGCTGCCTGATGGATGAAACCTCAGCTGC
AGCCCAAGAAAAAGAAACAAATAATCTGACTTCTTCTGGTCTTCAAACCCTTGCTTATCCTCTAGGTCCCAGGAATGATG
ACCTTTCACTCGACCCTGCATCTCAGCCAGCAAACCTTCAGTTCCCGCACGTAATGCCACTTCCCGAAGACATCAAAGGC
TCTTGCTTCCAGAGCGGGAATAAGCGTAACCATGACCCCTTTCTTGCTCCAGAACGATTTGGAAACAGCACTGTGGGCTT
TGGCAGTAATGTTCATTCCCAGGCACCAGAGAAAGTGACTCTTCTCGTAGATGGCACACGTTTTGTTGTGAATCCACAAA
TTTTCACTGCTCATCCAGATACCATGTTGGGAAGGATGTTTGGACCAGGAAGAGAGTACAACTTCACGCGGCCCAACGAG
AAGGGGGAGTATGAGATTGCTGAAGGAATCAGTGCAGCTGTGTTTCGAACGGTGCTGGATTATTACAAAACTGGTATCAT
CAATTGTCCTGATGGCATCTCTATCCCAGACCTTAGAGACACGTGCGATTATCTCTGCATTAACTTTGACTTCAACACTA
TCCGATGTCAGGATCTGAGTGCTTTACTGCATGAACTGTCTAACGACGGTGCTCACAAGCAGTTTGATCACTACCTCGAA
GAGCTGATCCTGCCCATCATGGTGGGCTGTGCCAAGAAGGGCGAGCGCGAGTGCCATATCGTTGTGCTGACAGATGAGGA
TTCTGTGGACTGGGATGAAGACCACCCCCCACCCATGGGGGAGGAATATTCCCAAATTCTTTACAGCTCTAAGCTCTACA
GATTCTTCAAGTACATTGAGAATCGGGATGTCGCCAAAACAGTGTTAAAGGAGCGGGGCCTGAAAAACATTCGCATTGGA
ATTGAAGGTTACCCTACCTGTAAAGAAAAAATTAAGAGAAGACCTGGTGGCCGATCTGAAGTAATCTATAATTATGTACA
GCGCCCCTTTATCCAGATGTCGTGGGAAAAGGAAGAAGGAAAGAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAAT
CCCTCACTAATCTGGTAGCTGCTGGAGAAGACGTCTTAGAGGACCAGGAGGTACTAATGTACCACCCACCCCAAGTGGAT
GAACTTGACCGGCTAAATGCCCCACTTTCTCAGATGGCCTCTAATGACTTTCAGGATTAG
ATGAACGTTCACTGTGGCAGTGAGAGTGACAGGTTCCTGCGGCCAGAGGCCAGCTGCCTGATGGATGAAACCTCAGCTGC
AGCCCAAGAAAAAGAAACAAATAATCTGACTTCTTCTGGTCTTCAAACCCTTGCTTATCCTCTAGGTCCCAGGAATGATG
ACCTTTCACTCGACCCTGCATCTCAGCCAGCAAACCTTCAGTTCCCGCACGTAATGCCACTTCCCGAAGACATCAAAGGC
TCTTGCTTCCAGAGCGGGAATAAGCGTAACCATGACCCCTTTCTTGCTCCAGAACGATTTGGAAACAGCACTGTGGGCTT
TGGCAGTAATGTTCATTCCCAGGCACCAGAGAAAGTGACTCTTCTCGTAGATGGCACACGTTTTGTTGTGAATCCACAAA
TTTTCACTGCTCATCCAGATACCATGTTGGGAAGGATGTTTGGACCAGGAAGAGAGTACAACTTCACGCGGCCCAACGAG
AAGGGGGAGTATGAGATTGCTGAAGGAATCAGTGCAGCTGTGTTTCGAACGGTGCTGGATTATTACAAAACTGGTATCAT
CAATTGTCCTGATGGCATCTCTATCCCAGACCTTAGAGACACGTGCGATTATCTCTGCATTAACTTTGACTTCAACACTA
TCCGATGTCAGGATCTGAGTGCTTTACTGCATGAACTGTCTAACGACGGTGCTCACAAGCAGTTTGATCACTACCTCGAA
GAGCTGATCCTGCCCATCATGGTGGGCTGTGCCAAGAAGGGCGAGCGCGAGTGCCATATCGTTGTGCTGACAGATGAGGA
TTCTGTGGACTGGGATGAAGACCACCCCCCACCCATGGGGGAGGAATATTCCCAAATTCTTTACAGCTCTAAGCTCTACA
GATTCTTCAAGTACATTGAGAATCGGGATGTCGCCAAAACAGTGTTAAAGGAGCGGGGCCTGAAAAACATTCGCATTGGA
ATTGAAGGTTACCCTACCTGTAAAGAAAAAATTAAGAGAAGACCTGGTGGCCGATCTGAAGTAATCTATAATTATGTACA
GCGCCCCTTTATCCAGATGTCGTGGGAAAAGGAAGAAGGAAAGAGTCGCCATGTGGATTTCCAGTGTGTTCGAAGCAAAT
CCCTCACTAATCTGGTAGCTGCTGGAGAAGACGTCTTAGAGGACCAGGAGGTACTAATGTACCACCCACCCCAAGTGGAT
GAACTTGACCGGCTAAATGCCCCACTTTCTCAGATGGCCTCTAATGACTTTCAGGATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 9 .11 RPM |
| SRP021940_embryo | 13 .50 RPM |
| SRP021940_cerebellum | 7 .01 RPM |
| SRP021940_testis | 4 .22 RPM |
| SRP021940_placental_villous | 6 .40 RPM |
| SRP021940_articular_cartilage | 1 .89 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000007139 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000012406 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_55 | 99.28 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000017166 retrocopies