Parental gene: | DCTD, ENSECAG00000017516 |
| Aliases: | None |
| Description: | dCMP deaminase [Source:HGNC Symbol;Acc:2710] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 27:26812105..26836034(+) |
>ENSECAG00000017516
CCCAACATGAGTGAAGTGTCCTGGAGAAAACGTGATGACTATTTGCAGTGGCCTGAGTATTTCATGGCGGTGGCCTTCCT
ATCGGCACAGAGAAGCAAAGATCCAAATTCGCAGGTTGGAGCCTGCATCGTGAATGCAGAAAACAAGATTGTCGGGATTG
GGTACAATGGAATGCCAAATGGGTGCAGCGATGACCTGTTGCCTTGGAGGAGGACAGCGGAGAATAAGCTGGATACTAAA
TACCCTTACGTGTGCCATGCCGAGCTCAATGCCATTATGAACAAAAACTCGGCCGACGTGAAGGGCTGTACCATGTACGT
CGCCTTGTTCCCGTGCAATGAGTGTGCTAAGCTCATCATCCAGGCAGGTATCAAAGAAGTTATTTTCATGTCTGATAAAT
ACCATGATAGCGATGAGGCAACCGCTGCCAGGCTCTTGTTTGATATGGCTGGGGTTACCTTCAGGAAATTCACACCAAAG
TGCAGCAAGATTGTCATTGACTTTGATTCAATTAACAGCAGACCGACTCAGAAGCCTCAGTGA
CCCAACATGAGTGAAGTGTCCTGGAGAAAACGTGATGACTATTTGCAGTGGCCTGAGTATTTCATGGCGGTGGCCTTCCT
ATCGGCACAGAGAAGCAAAGATCCAAATTCGCAGGTTGGAGCCTGCATCGTGAATGCAGAAAACAAGATTGTCGGGATTG
GGTACAATGGAATGCCAAATGGGTGCAGCGATGACCTGTTGCCTTGGAGGAGGACAGCGGAGAATAAGCTGGATACTAAA
TACCCTTACGTGTGCCATGCCGAGCTCAATGCCATTATGAACAAAAACTCGGCCGACGTGAAGGGCTGTACCATGTACGT
CGCCTTGTTCCCGTGCAATGAGTGTGCTAAGCTCATCATCCAGGCAGGTATCAAAGAAGTTATTTTCATGTCTGATAAAT
ACCATGATAGCGATGAGGCAACCGCTGCCAGGCTCTTGTTTGATATGGCTGGGGTTACCTTCAGGAAATTCACACCAAAG
TGCAGCAAGATTGTCATTGACTTTGATTCAATTAACAGCAGACCGACTCAGAAGCCTCAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 8 .07 RPM |
| SRP021940_embryo | 7 .39 RPM |
| SRP021940_cerebellum | 0 .88 RPM |
| SRP021940_testis | 2 .24 RPM |
| SRP021940_placental_villous | 5 .10 RPM |
| SRP021940_articular_cartilage | 5 .67 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Mus musculus | ENSMUSG00000031562 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000013215 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000015218 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000001460 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_829 | 65.03 | 79.44 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ecab_830 | 77.46 | 95.56 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ecab_915 | 98.89 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000017516 retrocopies