Parental gene: | NAE1, ENSECAG00000021954 |
| Aliases: | None |
| Description: | NEDD8 activating enzyme E1 subunit 1 [Source:HGNC Symbol;Acc:621] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 3:17371255..17392346(-) |
>ENSECAG00000021954
ATGGAATTTTTACAAGAATTAAATAATGATGTCTCTGGAAGTTTTGTGGAAGAGAGTCCAGAAAACCTTCTAGACAATGA
TCCTTCATTTTTCTGTAGGTTTACCATTGTGGTTGCAACTCAGCTTCCTGAAAGTACATTACTACGTTTAGCAGATGTCC
TGTGGAATTCCCAAATCCCTCTTTTGGTCTGTAGGACATATGGACTAGTTGGTTATATGAGGATCATTATAAAAGAACAT
CCAGTAATCGAATCTCATCCAGACAATGCATTAGAGGATCTACGGCTGGATAAGCCATTTCCTGAGCTGAGAGAACATTT
TCAGTCTTATGATTTGGAGCATATGGAAAAAAAGGACCATAGCCACACTCCGTGGATTGTGATCGTAGCTAAATATTTAG
CACAGTGGTATAGTGAAACAAATGGACGAATACCTAAAACGTATAAAGAAAAAGAAGACTTCAGAGATTTGATTAGACAA
GGAATTCTGAAGAATGAAAATGGGGCTCCAGAAGATGAAGAGAATTTTGAAGAAGCTATTAAAAATGTGAACACAGCACT
AAATACAACTCAGATCCCAAGCAGTATTGAAGATATATTTAATGATGATCGCTGCATAAATATCACCAAACAGACTCCAT
CATTTTGGATTTTAGCTCGTGCTTTAAAAGAATTTGTGGCCAAAGAGGGTCAAGGAAATTTACCTGTTCGAGGCACAATT
CCTGATATGATCGCCGATTCAGGCAAATATATAAAACTGCAAAATGTTTACCGTGAAAAAGCAAAGAAAGATGCTGCTGC
TGTGGGTAATCATGTTGCCAAATTGCTGCAGTCTATCGGCCAGGCACCAGAGTCCATTTCAGAGAAAGAATTAAAATTAC
TCTGTAACAATTCTGCATTTCTTCGCGTAGTAAGATGTCGATCCTTAGCTGAAGAATATGGCTTGGATACAGTTAACAAG
GATGAAATTATTTCCAGCATGGACAATCCAGATAATGAGATAGTATTATACTTAATGTTACGGGCTGTTGATAGGTTTCA
TAAACAACATGGTAGATATCCAGGGGTATCTAACTATCAAGTTGAAGAAGATATAGGAAAGTTGAAGTCTTGTCTCACTG
GCTTCCTTCAGGAATATGGATTATCTGTAATGGTGAAAGATGATTATGTCCACGAATTTTGCCGATACGGAGCTGCTGAG
CCACACACCATTGCTGCGTTCTTAGGGGGAGCTGCTGCTCAAGAGGTTATCAAAATAATCACCAAACAATTTGTAATTTT
TAATAATACTTACATTTACAGTGGCATGTCACAAACGTCAGCAACTTTCCAGTTGTAG
ATGGAATTTTTACAAGAATTAAATAATGATGTCTCTGGAAGTTTTGTGGAAGAGAGTCCAGAAAACCTTCTAGACAATGA
TCCTTCATTTTTCTGTAGGTTTACCATTGTGGTTGCAACTCAGCTTCCTGAAAGTACATTACTACGTTTAGCAGATGTCC
TGTGGAATTCCCAAATCCCTCTTTTGGTCTGTAGGACATATGGACTAGTTGGTTATATGAGGATCATTATAAAAGAACAT
CCAGTAATCGAATCTCATCCAGACAATGCATTAGAGGATCTACGGCTGGATAAGCCATTTCCTGAGCTGAGAGAACATTT
TCAGTCTTATGATTTGGAGCATATGGAAAAAAAGGACCATAGCCACACTCCGTGGATTGTGATCGTAGCTAAATATTTAG
CACAGTGGTATAGTGAAACAAATGGACGAATACCTAAAACGTATAAAGAAAAAGAAGACTTCAGAGATTTGATTAGACAA
GGAATTCTGAAGAATGAAAATGGGGCTCCAGAAGATGAAGAGAATTTTGAAGAAGCTATTAAAAATGTGAACACAGCACT
AAATACAACTCAGATCCCAAGCAGTATTGAAGATATATTTAATGATGATCGCTGCATAAATATCACCAAACAGACTCCAT
CATTTTGGATTTTAGCTCGTGCTTTAAAAGAATTTGTGGCCAAAGAGGGTCAAGGAAATTTACCTGTTCGAGGCACAATT
CCTGATATGATCGCCGATTCAGGCAAATATATAAAACTGCAAAATGTTTACCGTGAAAAAGCAAAGAAAGATGCTGCTGC
TGTGGGTAATCATGTTGCCAAATTGCTGCAGTCTATCGGCCAGGCACCAGAGTCCATTTCAGAGAAAGAATTAAAATTAC
TCTGTAACAATTCTGCATTTCTTCGCGTAGTAAGATGTCGATCCTTAGCTGAAGAATATGGCTTGGATACAGTTAACAAG
GATGAAATTATTTCCAGCATGGACAATCCAGATAATGAGATAGTATTATACTTAATGTTACGGGCTGTTGATAGGTTTCA
TAAACAACATGGTAGATATCCAGGGGTATCTAACTATCAAGTTGAAGAAGATATAGGAAAGTTGAAGTCTTGTCTCACTG
GCTTCCTTCAGGAATATGGATTATCTGTAATGGTGAAAGATGATTATGTCCACGAATTTTGCCGATACGGAGCTGCTGAG
CCACACACCATTGCTGCGTTCTTAGGGGGAGCTGCTGCTCAAGAGGTTATCAAAATAATCACCAAACAATTTGTAATTTT
TAATAATACTTACATTTACAGTGGCATGTCACAAACGTCAGCAACTTTCCAGTTGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 4 .78 RPM |
| SRP021940_embryo | 15 .34 RPM |
| SRP021940_cerebellum | 7 .43 RPM |
| SRP021940_testis | 10 .04 RPM |
| SRP021940_placental_villous | 9 .38 RPM |
| SRP021940_articular_cartilage | 4 .19 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Nomascus leucogenys | ENSNLEG00000004047 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000014645 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007428 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_942 | 65.96 | 51.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000021954 retrocopies