Parental gene: | WASF1, ENSECAG00000022222 |
| Aliases: | None |
| Description: | WAS protein family, member 1 [Source:HGNC Symbol;Acc:12732] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 10:59709981..59729250(-) |
>ENSECAG00000022222
ATGCCATTAGTGAAAAGAAACATCGATCCTAGGCACTTGTGCCACACAGCACTGCCTCGAGGCATTAAGAACGAACTGGA
ATGTGTAACCAATATTTCCTTGGCAAATATAATTAGACAACTAAGTAGCCTAAGTAAATATGCTGAAGATATATTTGGAG
AATTATTCAATGAAGCACATAGTTTTTCCTTCAGAGTTAATTCATTACAAGAACGTGTGGACCGTTTATCTGTTAGTGTT
ACACAGCTTGACCCTAAAGAAGAAGAATTGTCTTTGCAAGATATAACAATGAGAAAAGCTTTCCGAAGTTCTACAATTCA
AGATCAGCAGCTTTTCGACCGCAGGACTTTGCCTGTTCCCTTACAGGAGACATATGACGTCTGCGAACAGCCCCCGCCTC
TCAATATACTCACTCCGTATAGAGATGATGGTAAAGAAGGTTTGAAGTTCTATACCAATCCTTCATATTTCTTTGATCTA
TGGAAAGAAAAAATGTTGCAAGACACAGAGGATAAGAGGAAGGAAAAGAGGAAGCAGAAGCAGAAAAATCTAGATCGTCC
TCATGAACCAGAAAAAGTGCCAAGAGCACCTCATGACAGGCGGAGAGAATGGCAGAAGCTGGCCCAAGGTCCAGAGCTGG
CTGAAGATGATGCTAATCTCTTGCATAAGCATATTGAAGTTGCCAATGGCCCAGCCTCTCATTTTGAAACAAGACCTCAG
ACGTATGTGGATCATATGGATGGATCTTATTCACTTTCTGCCTTGCCATTTAGTCAGATGAGTGAGCTTTTGACTAGAGC
TGAGGAAAGAGTCTTAGTCAGACCACATGAACCACCTCCACCTCCACCAATGCATGGAGCAGGAGATGCAAAACCCATAC
CCACCTGTATCAGTTCTGCTACAGGTTTGATAGAAAATCGCCCTCAGTCACCAGCTACAGGCAGGACACCTGTGTTTGTG
AGCCCCACTCCCCCACCTCCACCACCACCTCTTCCATCTGCCTTGTCAACTTCTTCATTAAGAGCTTCAATGACTTCAAC
TCCTCCCCCACCAGTACCTCCCCCACCTCCACCTCCAGCCACTGCTTTGCAAGCTCCAGCAGTACCACCACCTCCAGCTC
CTCTTCAGATTGCCCCTGGAGTTCTTCACCCAGCTCCTCCTCCAATTGCACCTCCTCTGGTACAGCCCTCTCCACCAGTA
GCTAGAGCTGCCCCAGTATGTGAGACTGTACCAGTTCATCCACTCCCACAAGGTGAAGTCCAGGGGCTGCCTCCACCCCC
ACCACCGCCTCCTCTTCCTCCACCTGGCATTCGACCATCATCACCTGTCACAGTTGCAGCTCTTGCTCATCCTCCTTCTG
GGCTACATCCAACTCCATCTACTGCCCCAGGTCCCCATGTTCCATTAATGCCTCCATCTCCTCCATCACAAGTTATACCT
GCTTCCGAGCCAAAGCGTCATCCGTCAACCCTACCTGTAATCAGTGATGCCAGGAGTGTACTTCTGGAAGCAATACGAAA
AGGTATCCAGCTACGCAAAGTAGAAGAGCAGCGTGAACAGGAAGCTAAACACGAACGCATTGAAAATGATGTTGCCACCA
TCCTGTCCCGCCGTATTGCTGTGGAGTACAGTGATTCAGAAGATGATTCAGAATTTGATGAAGTAGATTGGTTGGAGTAA
ATGCCATTAGTGAAAAGAAACATCGATCCTAGGCACTTGTGCCACACAGCACTGCCTCGAGGCATTAAGAACGAACTGGA
ATGTGTAACCAATATTTCCTTGGCAAATATAATTAGACAACTAAGTAGCCTAAGTAAATATGCTGAAGATATATTTGGAG
AATTATTCAATGAAGCACATAGTTTTTCCTTCAGAGTTAATTCATTACAAGAACGTGTGGACCGTTTATCTGTTAGTGTT
ACACAGCTTGACCCTAAAGAAGAAGAATTGTCTTTGCAAGATATAACAATGAGAAAAGCTTTCCGAAGTTCTACAATTCA
AGATCAGCAGCTTTTCGACCGCAGGACTTTGCCTGTTCCCTTACAGGAGACATATGACGTCTGCGAACAGCCCCCGCCTC
TCAATATACTCACTCCGTATAGAGATGATGGTAAAGAAGGTTTGAAGTTCTATACCAATCCTTCATATTTCTTTGATCTA
TGGAAAGAAAAAATGTTGCAAGACACAGAGGATAAGAGGAAGGAAAAGAGGAAGCAGAAGCAGAAAAATCTAGATCGTCC
TCATGAACCAGAAAAAGTGCCAAGAGCACCTCATGACAGGCGGAGAGAATGGCAGAAGCTGGCCCAAGGTCCAGAGCTGG
CTGAAGATGATGCTAATCTCTTGCATAAGCATATTGAAGTTGCCAATGGCCCAGCCTCTCATTTTGAAACAAGACCTCAG
ACGTATGTGGATCATATGGATGGATCTTATTCACTTTCTGCCTTGCCATTTAGTCAGATGAGTGAGCTTTTGACTAGAGC
TGAGGAAAGAGTCTTAGTCAGACCACATGAACCACCTCCACCTCCACCAATGCATGGAGCAGGAGATGCAAAACCCATAC
CCACCTGTATCAGTTCTGCTACAGGTTTGATAGAAAATCGCCCTCAGTCACCAGCTACAGGCAGGACACCTGTGTTTGTG
AGCCCCACTCCCCCACCTCCACCACCACCTCTTCCATCTGCCTTGTCAACTTCTTCATTAAGAGCTTCAATGACTTCAAC
TCCTCCCCCACCAGTACCTCCCCCACCTCCACCTCCAGCCACTGCTTTGCAAGCTCCAGCAGTACCACCACCTCCAGCTC
CTCTTCAGATTGCCCCTGGAGTTCTTCACCCAGCTCCTCCTCCAATTGCACCTCCTCTGGTACAGCCCTCTCCACCAGTA
GCTAGAGCTGCCCCAGTATGTGAGACTGTACCAGTTCATCCACTCCCACAAGGTGAAGTCCAGGGGCTGCCTCCACCCCC
ACCACCGCCTCCTCTTCCTCCACCTGGCATTCGACCATCATCACCTGTCACAGTTGCAGCTCTTGCTCATCCTCCTTCTG
GGCTACATCCAACTCCATCTACTGCCCCAGGTCCCCATGTTCCATTAATGCCTCCATCTCCTCCATCACAAGTTATACCT
GCTTCCGAGCCAAAGCGTCATCCGTCAACCCTACCTGTAATCAGTGATGCCAGGAGTGTACTTCTGGAAGCAATACGAAA
AGGTATCCAGCTACGCAAAGTAGAAGAGCAGCGTGAACAGGAAGCTAAACACGAACGCATTGAAAATGATGTTGCCACCA
TCCTGTCCCGCCGTATTGCTGTGGAGTACAGTGATTCAGAAGATGATTCAGAATTTGATGAAGTAGATTGGTTGGAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 4 .78 RPM |
| SRP021940_embryo | 49 .07 RPM |
| SRP021940_cerebellum | 65 .43 RPM |
| SRP021940_testis | 110 .17 RPM |
| SRP021940_placental_villous | 6 .45 RPM |
| SRP021940_articular_cartilage | 0 .18 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000008623 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000005949 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_343 | 70.28 | 56.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000022222 retrocopies