Parental gene:

FAM133B, ENSECAG00000026810

Aliases:None
Description:family with sequence similarity 133, member B [Source:HGNC Symbol;Acc:28629]
Organism:Horse (Equus caballus)
Coordinates:4:36291521..36312750(-)


>ENSECAG00000026810
ATGGGGAAGCGGGACAATCGGGTGGCCTATATGAACCCAATAGCAATGGCCAGATCAAGGGGTCCAATCCAGTCTTCAGG
ACCAACGATCCAAGATTATCTGAATCGACCAAGGCCTACCTGGGAAGAAGTGAAAGAACAACTAGAAAAGAAGAAGAAGG
GCTCCAAAGCATTGGCTGAATTTGAAGAAAAAATGAATGAGAACTGGAAGAAAGAACTAGAAAAACACAGGGAGAAATTA
TTAAGTGGAAGTGAGAGTTCATCCAAAAAAAGACAGAGGAAGAAAAAAGAAAAGAAGAAATCTGGTAGGTATTCATCTTC
TTCTTCATCAAGCTCTGATTCTTCCAGCAGTTCTTCGGGTTCTGAAGATGAGGATAAGAAACAAGGAAAAAGGAAAAAGA
AAAAGAAGAACCGTTCACACAAATCTTCTGAAAGCTCCATATCAGAAACTGAATCAGACAGTAAGGATAGTTTAAAAAAG
AAAAAGAAGTCAAAGGATGCGACTGAGAAAGAAAAGGACATTAAAGGACTCAGCAAAAAAAGAAAGATGTATCCTGAAGA
TAAACCTTTATCATCTGAGTCCTTATCAGAATCTGATTATATTGAGGAGGTACGAGCGAAAAAGAAGAAAAGCAGTGAAG
AACGAGAGAAAACAACAGAAAAAACAAAAAAGAAAAAGAAGCATAAGAAACACAGTAAGAAGAAGAAAAAGAAGGCTGCT
AGTTCAAGTCCTGACTCACCG

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 2 .75 RPM
SRP021940_embryo 5 .65 RPM
SRP021940_cerebellum 1 .40 RPM
SRP021940_testis 1 .15 RPM
SRP021940_placental_villous 1 .88 RPM
SRP021940_articular_cartilage 0 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000007438 ortholog_one2one 1 retrogene
retro_amel_102,
Callithrix jacchus ENSCJAG00000013910 ortholog_one2one 3 retrogenes
retro_cjac_1084, retro_cjac_1163, retro_cjac_4095,
Homo sapiens ENSG00000234545 ortholog_one2one 4 retrogenes
retro_hsap_2336, retro_hsap_3179, retro_hsap_55, retro_hsap_577,
Loxodonta africana ENSLAFG00000029755 ortholog_one2one 1 retrogene
retro_lafr_594,
Myotis lucifugus ENSMLUG00000005933 ortholog_one2one 1 retrogene
retro_mluc_2301,
Macaca mulatta ENSMMUG00000019802 ortholog_one2one 4 retrogenes
retro_mmul_1415, retro_mmul_226, retro_mmul_420, retro_mmul_765,
Mus musculus ENSMUSG00000058503 ortholog_one2one 2 retrogenes
retro_mmus_3481, retro_mmus_3519,
Nomascus leucogenys ENSNLEG00000015333 ortholog_one2many 1 retrogene
retro_nleu_14,
Pongo abelii ENSPPYG00000025825 ortholog_one2many 1 retrogene
retro_pabe_225,
Rattus norvegicus ENSRNOG00000009163 ortholog_one2one 1 retrogene
retro_rnor_2891,
Sus scrofa ENSSSCG00000015317 ortholog_one2one 1 retrogene
retro_sscr_49,
Ictidomys tridecemlineatus ENSSTOG00000028195 ortholog_one2one 1 retrogene
retro_itri_12,
Tupaia belangeri ENSTBEG00000011674 ortholog_one2one 1 retrogene
retro_tbel_1,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_95 81.63 97.98
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Download FASTA sequences of all ENSECAG00000026810 retrocopies